FC930338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2E_ARATH (Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.832e-38 Identity = 86/156 (55.13%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 259 MYRERGTGG-------SKSEVVVGPVDRKRINDALDKQLERSSPSTSRTTINGKDMSVLLGKHPADHQRDSRSASLSKNHAXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHG 705 MY++R GG S+SE++ G +DRKRINDALDK L++SSPSTSR KD + A Q SRS + + WISWFCNLRGNEFFCEVD+DYIQDDFNLCGLSGQVPYYDYALDLILDVESS+G Sbjct: 1 MYKDRSGGGIMGGGGSSRSEILGGAIDRKRINDALDKHLKKSSPSTSRV-FTSKDKDSVPSTSTAKSQLHSRSPDVESD-------TDSEGSDVSGSEGDDTSWISWFCNLRGNEFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVESSNG 148
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2B_ARATH (Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.131e-37 Identity = 93/162 (57.41%), Postives = 103/162 (63.58%), Query Frame = 1 Query: 259 MYRERGTGGSKSEVVVGPVDRKRINDALDKQLERSSPSTSRTTINGKDMSV---------LLGKHPADH--QRDSRSASLSKNH--AXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHG 705 MYR+RGT S+ EVV DRKRINDAL ER SPSTSR +NGK L+GK +++ RDSRSASLSKN+ + WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLS VPYY+YALDLILDVESS G Sbjct: 1 MYRDRGTVNSRPEVV----DRKRINDAL----ERPSPSTSRQ-VNGKGKGTVTAATTTANLIGKQQSNNINHRDSRSASLSKNNTVSDDESDTDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSLVPYYEYALDLILDVESSQG 153
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2C_ARATH (Casein kinase II subunit beta' OS=Arabidopsis thaliana GN=CKB2 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37 Identity = 91/156 (58.33%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 259 MYRERGTGGSKSEVVVGPVDRKRINDALDKQLERSSPSTSRTTINGK----DMSVLLGKHPADHQRDSRSASLSKNH---AXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSHG 705 MYRERG GSKSEVV DRKRIN+ D R S S S+ +NGK SVL+GK + SRS S+SK + A WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLS QVPYYDYALDLILDVESSHG Sbjct: 1 MYRERGMVGSKSEVV----DRKRINEIHDN---RPSHSMSQP-VNGKGKVTSTSVLMGKQQLHDKESSRSGSISKTNISDAVDISDTDSEESEVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSHQVPYYDYALDLILDVESSHG 148
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2D_ARATH (Casein kinase II subunit beta-3 OS=Arabidopsis thaliana GN=CKB3 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.527e-34 Identity = 79/159 (49.69%), Postives = 101/159 (63.52%), Query Frame = 1 Query: 259 MYRERGTGG----SKSEVVVGPVDRKRINDALDKQLERSSPSTSRTTI-NGKDM------SVLLGKHPADHQRDSRSASLSKNHAXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVESSH 702 MY+ER GG S+SE++ G +DRKRINDAL+K+LE+SS ST+ + + + KD S + + DS + +S + WISWFCNLRGN+FFCEVD+DYIQDDFNLCGLSGQVPYYDYALDLILDV++S+ Sbjct: 1 MYKERSGGGGGGSSRSEILGGAIDRKRINDALNKKLEKSSTSTTTSRVFSSKDKDPFSFTSTKTQLPDVESETDSEGSDVSGSEGDDTS------------------WISWFCNLRGNDFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVDASN 141
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2B_XENLA (Casein kinase II subunit beta OS=Xenopus laevis GN=csnk2b PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 547 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVE 693 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLE 57
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2B_RAT (Casein kinase II subunit beta OS=Rattus norvegicus GN=Csnk2b PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 547 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVE 693 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLE 57
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2B_RABIT (Casein kinase II subunit beta OS=Oryctolagus cuniculus GN=CSNK2B PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 547 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVE 693 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLE 57
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2B_PIG (Casein kinase II subunit beta OS=Sus scrofa GN=CSNK2B PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 547 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVE 693 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLE 57
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2B_MOUSE (Casein kinase II subunit beta OS=Mus musculus GN=Csnk2b PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 547 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVE 693 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLE 57
BLAST of FC930338 vs. ExPASy Swiss-Prot
Match: CSK2B_HUMAN (Casein kinase II subunit beta OS=Homo sapiens GN=CSNK2B PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 547 WISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYDYALDLILDVE 693 WISWFC LRGNEFFCEVD+DYIQD FNL GL+ QVP+Y ALD+ILD+E Sbjct: 9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLE 57 The following BLAST results are available for this feature:
BLAST of FC930338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930338 ID=FC930338; Name=FC930338; organism=Citrus clementina; type=EST; length=707bpback to top |