FC930446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930446 vs. ExPASy Swiss-Prot
Match: TOM20_SOLTU (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20 PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 8.153e-75 Identity = 141/196 (71.94%), Postives = 154/196 (78.57%), Query Frame = 1 Query: 100 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFAKS 687 M+MQS+FDRLLFFEHARK+AE YA++PLDADNLTRWGGALLELSQFQ V +SK+MI DA SKLEEAL V+P +HD LWCLGNAHTSH FLTPD DEAK YF KAT FQQA D +PSN+LY+KSLEV AKAPELHMEIH+HG QQTM DLKYDIFGWVILAVGIVAWVGFAKS Sbjct: 1 MEMQSEFDRLLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEALTVNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVTAKAPELHMEIHRHGPMQQTM---AAEPSTSTSTKSSKKTKSSDLKYDIFGWVILAVGIVAWVGFAKS 193
BLAST of FC930446 vs. ExPASy Swiss-Prot
Match: TO203_ARATH (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana GN=TOM20-3 PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 5.870e-57 Identity = 106/196 (54.08%), Postives = 136/196 (69.39%), Query Frame = 1 Query: 100 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFAKS 687 MD +++FDR+L FE R+ AE Y +PLDADNLTRWGG LLELSQF ++ D+K+MI +AI+K EEAL++ P + + +WC+GNA+TS AFLTPD+ EAK F+ AT +FQQAVDE+P N Y KSLE+ AKAP+LH E +K GLG Q M D KYD GWVILA+G+VAW+ FAK+ Sbjct: 1 MDTETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAYKQGLGSQPM--GRVEAPAPPSSKAVKNKKSSDAKYDAMGWVILAIGVVAWISFAKA 194
BLAST of FC930446 vs. ExPASy Swiss-Prot
Match: TO202_ARATH (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana GN=TOM20-2 PE=1 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 4.969e-56 Identity = 103/198 (52.02%), Postives = 137/198 (69.19%), Query Frame = 1 Query: 112 SDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTM-----XXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFAKSI 690 +DF+RL+ FEHARK +EA Y DPLD++NL +WGGALLELSQFQ +P++K M+ DAISKLEEAL ++P +H LWC+ NA+T+HAF D +EAKE+F+KAT YFQ+A +E+P N+ Y+KSL+ + KAPELHM+ G+GQQ + + YD+ GW+ILA GIVAWVG AKS+ Sbjct: 6 ADFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLNDAISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGNDTYRKSLDSSLKAPELHMQFMNQGMGQQILGGGGGGGGGGMASSNVSQSSKKKKRNTEFTYDVCGWIILACGIVAWVGMAKSL 203
BLAST of FC930446 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSJ (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. japonica GN=TOM20 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.389e-50 Identity = 101/196 (51.53%), Postives = 128/196 (65.31%), Query Frame = 1 Query: 100 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFAKS 687 M SD +R+ FF+ A + A+ Y ++P DADNLTRWGGALLELSQ + P+S K + DA SKLEEAL + P + D LWCLGNA TSH F T D +A E+F KAT FQ+AVD EP+N+LY+KSL++++KAPELHMEIH+ Q + D YD+FGWV+L VG+V WVG AKS Sbjct: 3 MGAMSDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQ----AASSTSNTRQSRKKKKDSDFWYDVFGWVVLGVGMVVWVGLAKS 194
BLAST of FC930446 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSI (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. indica GN=TOM20 PE=2 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 2.389e-50 Identity = 101/196 (51.53%), Postives = 128/196 (65.31%), Query Frame = 1 Query: 100 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFAKS 687 M SD +R+ FF+ A + A+ Y ++P DADNLTRWGGALLELSQ + P+S K + DA SKLEEAL + P + D LWCLGNA TSH F T D +A E+F KAT FQ+AVD EP+N+LY+KSL++++KAPELHMEIH+ Q + D YD+FGWV+L VG+V WVG AKS Sbjct: 3 MGAMSDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAESKLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQ-----AASSTSNTRQSRKKKDSDFWYDVFGWVVLGVGMVVWVGLAKS 193
BLAST of FC930446 vs. ExPASy Swiss-Prot
Match: TO204_ARATH (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana GN=TOM20-4 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.389e-50 Identity = 103/196 (52.55%), Postives = 129/196 (65.82%), Query Frame = 1 Query: 100 MDMQSDFDRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGLGQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFAKS 687 MDMQ++ +RL+ FEHARK AEA Y K+PLDA+NLTRW GALLELSQFQT P K+MIL+AI KL EAL++ P +HD LW +GNAH S FL+ DQ EA + F KA+ +FQ AV+E+P +ELY+KSL +A+KAPELH + KYD+FGWVILA +VAW+ FA S Sbjct: 1 MDMQNENERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQTEP--KQMILEAILKLGEALVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYRKSLTLASKAPELHT--------------GGTAGPSSNSAKTMKQKKTSEFKYDVFGWVILASYVVAWISFANS 180
BLAST of FC930446 vs. ExPASy Swiss-Prot
Match: TO201_ARATH (Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis thaliana GN=TOM20-1 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.732e-45 Identity = 97/193 (50.26%), Postives = 123/193 (63.73%), Query Frame = 1 Query: 121 DRLLFFEHARKTAEAAYAKDPLDADNLTRWGGALLELSQFQTVPDSKKMILDAISKLEEALMVSPNRHDTLWCLGNAHTSHAFLTPDQDEAKEYFNKATLYFQQAVDEEPSNELYQKSLEVAAKAPELHMEIHKHGL-----GQQTMXXXXXXXXXXXXXXXXXXXXXXDLKYDIFGWVILAVGIVAWVGFAK 684 D+L FFE RK AE Y +P DADNL RWG ALLELSQFQ V DS KMI DAISKLE+A+++ P +HD +WCLGNA+TS+A LTPD +A+ F A L+F AV ++P N++Y KSLE+A KAP+LH HK+ L G +T+ D KY + GWVILA+G+VA + F K Sbjct: 2 DKLNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDAILIDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLEMADKAPQLHTGFHKNRLLSLLGGVETL--------AIPSPKVVKNKKSSDEKYIVMGWVILAIGVVACISFRK 186 The following BLAST results are available for this feature:
BLAST of FC930446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930446 ID=FC930446; Name=FC930446; organism=Citrus clementina; type=EST; length=694bpback to top |