FC930758
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 1.815e-77 Identity = 146/183 (79.78%), Postives = 161/183 (87.98%), Query Frame = 1 Query: 157 NDDFRSNGFYGSGYLGPQFQLPCRGFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 +DD S+ S L F RGFSS S++P ++ LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LAN+VDLGSLRDPQQDAERVKNPEWLVV+GVCTH Sbjct: 21 SDDDSSSPRSISPSLASVFLHHTRGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTH 203
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 6.896e-77 Identity = 142/169 (84.02%), Postives = 155/169 (91.72%), Query Frame = 1 Query: 199 LGPQFQLPCRGFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 L QF RGFSS S++P ++ LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEEDI LAN+VDLGSLRDPQQDAERVKNPEWLVV+GVCTH Sbjct: 45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTH 213
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.536e-76 Identity = 141/169 (83.43%), Postives = 155/169 (91.72%), Query Frame = 1 Query: 199 LGPQFQLPCRGFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 L QF RGFSS S++P ++ LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT+EDI LAN+VDLGSLRDPQQDAERVKNPEWLVV+GVCTH Sbjct: 45 LASQFLDQFRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTH 213
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 4.470e-76 Identity = 144/183 (78.69%), Postives = 160/183 (87.43%), Query Frame = 1 Query: 157 NDDFRSNGFYGSGYLGPQFQLPCRGFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 +DD S+ S L F RGFSS S++ ++ LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LAN+VDLGSLRDPQQDAERVK+PEWLVV+GVCTH Sbjct: 35 SDDDSSSPRSISPSLASVFLHHTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTH 217
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.218e-75 Identity = 138/160 (86.25%), Postives = 152/160 (95.00%), Query Frame = 1 Query: 226 RGFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 RGFSS S++P ++ LV +PATVAA+KNP+SKIVYD+ NHERYPPGDPSKRAFAYFVLTGGRFVYAS +RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT++DIKLAN+VDLG+LRDPQQDAERVKNPEWLVVVGVCTH Sbjct: 51 RGFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTH 210
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 2.897e-75 Identity = 137/159 (86.16%), Postives = 151/159 (94.97%), Query Frame = 1 Query: 229 GFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 GFSS S++ ++ LVP +P TVAA+KNPTSKIVYDE+NHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLLILKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DI LAN+VDLGSLRDPQQDAERVK+PEWLVV+GVCTH Sbjct: 23 GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTH 181
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_MAIZE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.217e-73 Identity = 134/166 (80.72%), Postives = 154/166 (92.77%), Query Frame = 1 Query: 211 FQLPCRGFSS-ESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 F + RGFSS E++ PRN+++ + +PATVAAVKNP K+VYDEYNHERYPPGDPSKRAFAYFVL+GGRF+YASL+RLL+LKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTE+DIKLAN+VD+ SLR P+QDAERVKNPEWLVV+GVCTH Sbjct: 53 FFVASRGFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWLVVIGVCTH 218
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_NEUCR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora crassa GN=NCU06606 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 385 FAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 F+YF++ + A+ + I +F+ +MSAS DVLAMA +EVDL++I G V +KWRGKPVFIR RT +I+ AN V++ +LRDP+ DA+RVK PEWLV++GVCTH Sbjct: 70 FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKKPEWLVMLGVCTH 176
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_YEAST (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saccharomyces cerevisiae GN=RIP1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 53/109 (48.62%), Postives = 83/109 (76.15%), Query Frame = 1 Query: 379 RAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 R++AYF++ + ++ + + F+ SM+A+ DVLAMA +EV+L++I G V VKW+GKPVFIR RT +I+ AN+VD+ +L+DPQ DA+RVK+P+WL+++G+CTH Sbjct: 53 RSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTH 161
BLAST of FC930758 vs. ExPASy Swiss-Prot
Match: UCRI_SCHPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Schizosaccharomyces pombe GN=rip1 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.750e-25 Identity = 59/114 (51.75%), Postives = 80/114 (70.18%), Query Frame = 1 Query: 364 GDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTH 705 GD S R +Y ++ + A+ + + F+ S SAS DVLAM+ EVDLS I G + VKW+GKPVFIR RT E+I+ AN+VD+ +LRDPQ D++RV+ PEWLV++GVCTH Sbjct: 62 GDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPEWLVMIGVCTH 174 The following BLAST results are available for this feature:
BLAST of FC930758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930758 ID=FC930758; Name=FC930758; organism=Citrus clementina; type=EST; length=705bpback to top |