FC930782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_HELAN (40S ribosomal protein S3a OS=Helianthus annuus GN=RPS3A PE=2 SV=2) HSP 1 Score: 299.671 bits (766), Expect = 8.969e-81 Identity = 146/174 (83.91%), Postives = 160/174 (91.95%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 AADPF+KKDWYDIKAPS F RNVGKTLVTRTQGTKIASEGLKHRVFEVSL DL N+E+H+YRKIRLRAEDVQGKNVLTNFWGM+ TTDKLRSLV+KW +LIEA+VDVKTTDNFTLR+FCIGFTK+ NQVKRTCYAQ+SQI+QIRRKMREIMV QA +CDLK LV+KFI E I Sbjct: 20 AADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A2_VITVI (40S ribosomal protein S3a-2 OS=Vitis vinifera GN=GSVIVT00031140001 PE=3 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 8.969e-81 Identity = 147/174 (84.48%), Postives = 159/174 (91.38%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 AADPFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFE+SL DL N+E+HAYRKIRLRAEDVQGKNVLTNFWGM+FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCI FTK+ NQ K+T YAQ+SQIRQIRRKMREIM QAASCDLK LV KFI E+I Sbjct: 20 AADPFAKKDWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKKRQNQNKKTSYAQSSQIRQIRRKMREIMTTQAASCDLKELVRKFIPEMI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_ORYSJ (40S ribosomal protein S3a OS=Oryza sativa subsp. japonica GN=RPS3A PE=2 SV=2) HSP 1 Score: 298.901 bits (764), Expect = 1.530e-80 Identity = 147/172 (85.47%), Postives = 156/172 (90.70%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 DPFAKKDWYDIKAPS F VRN+GKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E+ AYRKIRLRAEDVQGKNVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTD + LRLFCIGFTKR PNQVKRTCYAQ SQIRQIRRKM EIM QA+SCDLK LV KFI EVI Sbjct: 22 DPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_CICAR (40S ribosomal protein S3a OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 1.998e-80 Identity = 146/174 (83.91%), Postives = 162/174 (93.10%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 AADPF+KKDWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKHRVFE+SL DL +E++A+RKIRLRAEDVQGKNVLTNF+GM+FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLR+FCIGFTKR NQVKRTCYAQ+SQIRQIRRKMREIMV QA SCDLK LV KFI E+I Sbjct: 20 AADPFSKKDWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_CATRO (40S ribosomal protein S3a OS=Catharanthus roseus GN=RPS3A PE=2 SV=4) HSP 1 Score: 296.975 bits (759), Expect = 5.814e-80 Identity = 144/174 (82.76%), Postives = 160/174 (91.95%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 AADPFAKKDWYDIKAPS F VRNVGKTLVTRTQGTKIASEGL+HRVFE+SL DL +E+H++RKIRLRAED+QGKNVLTNFWGM+FTTDKLRSLVRKW +LIEA+VDVKTTD++TLR+FCIGFTK+ NQ KRTCYAQ+SQIRQIRRKMREIMV QA SCDLK LV+KFI E I Sbjct: 20 AADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A1_VITVI (40S ribosomal protein S3a-1 OS=Vitis vinifera GN=GSVIVT00020038001 PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 1.870e-78 Identity = 144/174 (82.76%), Postives = 156/174 (89.66%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 AADPFAKKDWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKHRVFE+SL DL +E+ AYRKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLVRKW TLIEA+VDVKTTDN+TLRLFCI FTK+ NQ K+TCYAQ+SQIRQIRRKMREIM A SCDLK LV+KFI E I Sbjct: 20 AADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_TOBAC (40S ribosomal protein S3a OS=Nicotiana tabacum GN=cyc07 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 2.701e-77 Identity = 141/174 (81.03%), Postives = 157/174 (90.23%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 AADP+AKKDWYDIKAPS F ++NVGKTLVTRTQGTKIASEGLKHRVFEVSL DL +E+ ++RKIRLRAEDVQGKNVLTNFWGM+FTTDKLRSLV+KW TLIEA+VDVKTTD++TLR+FCI FTK+ PNQ KRTCYAQ+SQIRQIRRKM EIM QA+SCDLK LV KFI E I Sbjct: 20 AADPYAKKDWYDIKAPSVFDIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A2_ARATH (40S ribosomal protein S3a-2 OS=Arabidopsis thaliana GN=RPS3AB PE=2 SV=3) HSP 1 Score: 287.73 bits (735), Expect = 3.527e-77 Identity = 140/174 (80.46%), Postives = 155/174 (89.08%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 A DPF+KKDWYD+KAP F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL N+E++AYRKIRLRAEDVQG+NVLT FWGM+FTTDKLRSLV+KW TLIEA+VDVKTTD +TLR+FCI FTKR NQVKRTCYAQ+SQIRQIRRKM EIMV +A+SCDLK LV KFI E I Sbjct: 20 AVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A1_ARATH (40S ribosomal protein S3a-1 OS=Arabidopsis thaliana GN=RPS3AA PE=1 SV=3) HSP 1 Score: 286.96 bits (733), Expect = 6.016e-77 Identity = 140/174 (80.46%), Postives = 156/174 (89.66%), Query Frame = 1 Query: 133 AADPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVI 654 A DPF+KKDWYD+KAPS F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E++AYRKIRLRAEDVQG+NVL FWGM+FTTDKLRSLV+KW TLIEA+VDVKTTD++TLRLFCI FTKR NQVKRTCYAQ+SQIRQIRRKMR+IMV +A+SCDLK LV KFI E I Sbjct: 20 AVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCDLKDLVAKFIPEAI 193
BLAST of FC930782 vs. ExPASy Swiss-Prot
Match: RS3A_BRARA (40S ribosomal protein S3a OS=Brassica rapa GN=RPS3A PE=2 SV=2) HSP 1 Score: 282.337 bits (721), Expect = 1.482e-75 Identity = 141/173 (81.50%), Postives = 154/173 (89.02%), Query Frame = 1 Query: 139 DPFAKKDWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMV-AQAASCDLKSLVEKFIAEVI 654 DPFAKKDWYDIKAPS F RNVGKTLV+RTQGTKIASEGLKHRVFEVSL DL +E+ AYRKIRLRAEDVQG+NVLT FWGM+FTTDKLRSLV+KW TLIE++VDVKTTDN+TLRLFCI FTKR NQVKRTCYAQ+SQIRQIR KMREIM+ +A+SCDLK LV KFI E I Sbjct: 22 DPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESI 194 The following BLAST results are available for this feature:
BLAST of FC930782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930782 ID=FC930782; Name=FC930782; organism=Citrus clementina; type=EST; length=656bpback to top |