FC930797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930797 vs. ExPASy Swiss-Prot
Match: SCL33_ARATH (Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15 Identity = 53/145 (36.55%), Postives = 68/145 (46.90%), Query Frame = 1 Query: 265 MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLETNPHPPAGXXXXXXXXXXXXXXXXXAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYP----PSPNHVLPCLGQNIDSPDVHYTSSSS 687 M + GFPGS+D F FP L + S + P L+ PP +VLKYIS++LMEED+E K CM D L+LQAAEKS Y+ LG+KYP P L Q + SP +SS+ Sbjct: 1 MGSYSAGFPGSLDWFDFPG-------------LGNGSYLNDQPLLDIGSVPPPLDPYPQQNLASADADFSDSVLKYISQVLMEEDMEDKPCMFHDALSLQAAEKSLYEALGEKYPVDDSDQPLTTTTSLAQLVSSPGGSSYASST 132
BLAST of FC930797 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 56/151 (37.09%), Postives = 71/151 (47.02%), Query Frame = 1 Query: 280 EGFPGSMD------GFKFPASSCSNQNLANAFKLKH-NSTNHHPPFL------ETNPHPPAGXXXXXXXXXXXXXXXXXAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSPNHVLPCLGQNIDSPDVHYTSSSSGS 693 +GFPGSMD F P SS LAN F L + ++ PP N +VLKYIS++LMEED+E K CM D LALQAAEKS Y+ LG+KYP S + ++D P+ + S GS Sbjct: 6 DGFPGSMDELDFNKDFDLPPSSNQTLGLANGFYLDDLDFSSLDPPEAYPSQNNNNNNINNKAVAGDLLSSSSDDADFSDSVLKYISQVLMEEDMEEKPCMFHDALALQAAEKSLYEALGEKYPSSSS------ASSVDHPERLASDSPDGS 150
BLAST of FC930797 vs. ExPASy Swiss-Prot
Match: SCL9_ARATH (Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 478 AVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSPNHVLPCLGQNIDSPD 663 AVL YIS++L EED++ K CMLQ+ L L+AAE+S Y+ +G+KYPPSP L +N ++ D Sbjct: 80 AVLGYISQMLNEEDMDDKVCMLQESLDLEAAERSLYEAIGKKYPPSPERNLAFAERNSENLD 141
BLAST of FC930797 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 49/121 (40.50%), Postives = 64/121 (52.89%), Query Frame = 1 Query: 265 MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLET----NPHPPAGXXXXXXXXXXXXXXXXXAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPS 615 MDAI P +DGF+F S S N L+ +TN F E+ NP P V KYI+++LMEEDLEG++CML+D LALQAAE+SF++VL + P S Sbjct: 1 MDAIL---PVPVDGFRFDTGSGSCCKPRN--NLESGTTNRFTCFNESESQSNPSPTESKVCSDYLP----------VFKYINDMLMEEDLEGQSCMLEDSLALQAAERSFFEVLQDQTPIS 106 The following BLAST results are available for this feature:
BLAST of FC930797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930797 ID=FC930797; Name=FC930797; organism=Citrus clementina; type=EST; length=695bpback to top |