FC931155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.388e-47 Identity = 85/120 (70.83%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 262 NKESVPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFDL-QGEKLNE 618 + E VPCDFC ++ AVL+CRAD+AKLCL CD VH+ANLLS+KH+RSQICDNC +EPV+ RC TDNL+LCQECDWD HGSCSVS AH R +EGFSGCPSALELA++W DL QG K E Sbjct: 3 SSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLEQGRKDEE 122
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.388e-47 Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 274 VPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFDLQGEKLNE-----TASFG 633 V C+FC ++ AVL+CRAD+AKLCL CD HVHSANLLS+KH+RSQICDNC EPV+ RC TDNLVLCQECDWD HGSCS SA H+R +EGFSGCPS LELA++W DL+G+K + T +FG Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKKEDDEDELTKNFG 134
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL9_ARATH (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.461e-28 Identity = 57/124 (45.97%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAH---------GSCSVSAAHDRVPIEGFSGCPSALELASMWNF--DLQGEKLNE 618 CDFC +Q +++YCR+D+A LCL CD VHSAN LSK+H R+ +C+ C ++P T RC + + LCQ CDW H S + H R I +SGCPS+ ELAS+W+F DL G+ + E Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDLAGQSICE 128
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL10_ARATH (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana GN=COL10 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.214e-28 Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHG--SCSVSAAHDRVPIEGFSGCPSALELASMWNF--DLQGEKLNETA 624 CDFC +Q +++YCR+D+A LCL CD +VHSAN LSK+H R+ +C+ C ++P + RC+ + + LCQ CDW H + + ++ H R I +SGCPS+ EL+S+W+F DL E+A Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAEESA 123
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.062e-27 Identity = 53/105 (50.48%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFD 594 CD+C +A++YC+ADSAKLCL CD VH AN L KH RS +CD+C P + C T+ VLCQ CDW H + S+ H R P EGF+GCPS EL ++ D Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHH--TASSSLHSRRPFEGFTGCPSVPELLAIVGLD 115
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL12_ARATH (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana GN=COL12 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.635e-22 Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFDLQ 600 CD C+ A++YC++D AKLCL CD HVHSAN LS +HIRS IC+ C S+P RC + + CQ C W H S H + FSGCPS + MW+ L+ Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRCLDEKVSYCQGCHW--HESNCSELGHRVQSLNPFSGCPSPTDFNRMWSSILE 109
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL11_ARATH (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana GN=COL11 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFDLQGEKLNETASFGE 636 CDFC + A++YC++DSAKLCL CD +VHSAN LS++H RS +C+ C +P C +N+ LCQ C W A S H + +S CPS + +W+ L+ + + F + Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNENVSLCQGCQWTA--SNCTGLGHRLQSLNPYSDCPSPSDFGKIWSSTLEPSVTSLVSPFSD 121
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COLX_ARATH (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana GN=At1g68190 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 262 NKESVPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNF 591 N E V C+FC AV+YC AD+A LCL CD VHSAN LS +H+R+ +CD+C+++P RC + LC C+ HG S+ H R + ++GCP A + A MW F Sbjct: 9 NMERV-CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRCFDHKMFLCHGCNDKFHG--GGSSEHRRRDLRCYTGCPPAKDFAVMWGF 115
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 226 LKMDMVSPQSDRNKESVPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSG 552 LK + S N + PCD C +YC ADSA LC+ CD VHSAN ++ +H R ++C++C P F C D+ LC CD + H + ++ H RVPI SG Sbjct: 2 LKQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISG 110
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 1 Query: 280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGF 546 CD C A LYCR D+A LCL CD VH+AN L+ +H R +C+ C P C D LC CD D H + ++ H+RVP+ F Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 94 The following BLAST results are available for this feature:
BLAST of FC931155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931155 ID=FC931155; Name=FC931155; organism=Citrus clementina; type=EST; length=678bpback to top |