FC931235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931235 vs. ExPASy Swiss-Prot
Match: LONF1_HUMAN (LON peptidase N-terminal domain and RING finger protein 1 OS=Homo sapiens GN=LONRF1 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.003e-32 Identity = 72/174 (41.38%), Postives = 106/174 (60.92%), Query Frame = 3 Query: 243 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTLNSIIQKNFPEEYAERKSEHD---SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRR-IMEGNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIEVVEDFR 746 DF+C+LC++L +EP+TTPCGHSFC++CL + +D CPLC+ L ++ R V+ L +I K P+E +ERK +D + ++ +P+FV + P PLH+FEPRYRLM+RR I G + GM + D T S AD+ C ++I LPDGR V++ + FR Sbjct: 476 DFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLLEELIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMIRRSIQTGTKQFGMCVSD-TQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFR 648
BLAST of FC931235 vs. ExPASy Swiss-Prot
Match: LONF3_MOUSE (LON peptidase N-terminal domain and RING finger protein 3 OS=Mus musculus GN=Lonrf3 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.875e-30 Identity = 71/167 (42.51%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 243 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLF--ITPRTCAVSVTLNSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLE 722 D +C+LC++L YEP+TTPCGH+FC CL + +D KCPLC+ VL + R + +V L +I PEE+ ERK E + L N + +P+FV + P PLHIFEP YRLM+RR +E G + GM + DP G V ++ C +EI + DGR V++ Sbjct: 458 DLECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDVLLQCLPSRKYSKNVILEELIATFLPEEFKERKRLYEEEMEELSNLNKN-VPIFVCTMAYPTVPCPLHIFEPCYRLMIRRCIETGTRQFGMCLGDPVKGFV-EYGCILEIRNVQFFSDGRSVVD 622
BLAST of FC931235 vs. ExPASy Swiss-Prot
Match: LONF2_HUMAN (LON peptidase N-terminal domain and RING finger protein 2 OS=Homo sapiens GN=LONRF2 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.176e-30 Identity = 69/175 (39.43%), Postives = 102/175 (58.29%), Query Frame = 3 Query: 243 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTLNSIIQKNFPEEYAERKSEHD----SLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLEIEVVEDFR 746 DF+C LC++LL+EP+TTPCGH+FC CL + +D CPLC+ L + R ++V +I + P+E ++RK +D L N D +P+FV + P PLH+FEPRYRLM+RR ME G R GM + G ++++ C +EI + PDG V++ + FR Sbjct: 446 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVLAEELIFRYLPDELSDRKRIYDEEMSELSNLTRD-VPIFVCAMAFPTVPCPLHVFEPRYRLMIRRCMETGTKRFGMCLSAEHAG-LSEYGCMLEIKDVRTFPDGSSVVDAIGISRFR 618
BLAST of FC931235 vs. ExPASy Swiss-Prot
Match: LONF3_MACFA (LON peptidase N-terminal domain and RING finger protein 3 OS=Macaca fascicularis GN=LONRF3 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.535e-29 Identity = 69/167 (41.32%), Postives = 98/167 (58.68%), Query Frame = 3 Query: 243 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTLNSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLE 722 D +C LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V + +I K PEE ER+ E + L N + +P+FV + P PLHIFEP YRLM+RR +E G + GM + DP G A++ C +EI + DGR V++ Sbjct: 423 DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIMEELIAKFLPEELKERRKLYEEEMEELSNLNKN-VPIFVCTMAYPTVPCPLHIFEPCYRLMIRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVD 587
BLAST of FC931235 vs. ExPASy Swiss-Prot
Match: LONF3_HUMAN (LON peptidase N-terminal domain and RING finger protein 3 OS=Homo sapiens GN=LONRF3 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.535e-29 Identity = 69/167 (41.32%), Postives = 98/167 (58.68%), Query Frame = 3 Query: 243 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVL--FITPRTCAVSVTLNSIIQKNFPEEYAERK----SEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRIME-GNHRMGMVIIDPTTGSVADFACEVEITECEPLPDGRFVLE 722 D +C LC++L YEP+TTPCGH+FC CL + +D KCPLC+ L + R + +V + +I K PEE ER+ E + L N + +P+FV + P PLHIFEP YRLM+RR +E G + GM + DP G A++ C +EI + DGR V++ Sbjct: 464 DLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIMEELIAKFLPEELKERRKLYEEEMEELSNLNKN-VPIFVCTMAYPTVPCPLHIFEPCYRLMIRRCIETGTRQFGMCLGDPVKG-FAEYGCILEIRNVQFFADGRSVVD 628
BLAST of FC931235 vs. ExPASy Swiss-Prot
Match: YOXA_SCHPO (LON peptidase N-terminal domain and RING finger protein C14F5.10c OS=Schizosaccharomyces pombe GN=SPBC14F5.10c PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.304e-15 Identity = 50/181 (27.62%), Postives = 91/181 (50.28%), Query Frame = 3 Query: 243 DFDCTLCLKLLYEPITTPCGHSFCRSCLFQSMDRGNKCPLCRAVLFITPRTC----AVSVTLNSIIQKNFPEEYAERKSEHDSLINFGVDLMPLFVMDVVIPCQRFPLHIFEPRYRLMVRRIMEGNHR--MGMVIIDPTTGS---------------VADFACEVEITECEPLPDGRFVLE 722 + +C +C +LY+P+ +PCGH+FC CL Q++ + +CP CR F P A S ++ + ++ +P+ + ER+ + +PLF+ + P LHIFE RY +M+++ +E + R + M + + G +++ +EI + EPL DGR ++E Sbjct: 166 ELECQICFGMLYDPVVSPCGHTFCGPCLMQALTQSPQCPTCR---FGLPSPVVLEHAKSHSITTFLRDFYPDNWLERQKSWEE-EKEQESWLPLFISMLAYPRMPTFLHIFELRYHIMIKKCLETSKRFCIAMPLRARSDGHNEHRELRNARGQRLFCSEYGTILEIIQVEPLIDGRSLVE 342 The following BLAST results are available for this feature:
BLAST of FC931235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931235 ID=FC931235; Name=FC931235; organism=Citrus clementina; type=EST; length=760bpback to top |