FC931238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931238 vs. ExPASy Swiss-Prot
Match: SYP51_ARATH (Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.174e-80 Identity = 150/195 (76.92%), Postives = 176/195 (90.26%), Query Frame = 3 Query: 147 MASASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKN 731 MAS+SDSW++ YNEA+KL+++INGMISERSS +GP++QR ASAIRRKITI G +LDSLQSLL+++ GK PISEKEMNRRKDM+ NLRSK NQMA+ LNMSNFANRDSLLGP+IK D M+R TG+DNQG+VG+QRQ+MREQDEGLE+LE TV+STKHIALAV+EELDL TRLIDDLD HVDVTDSRLRRVQK+ Sbjct: 1 MASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSLQSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQKS 194
BLAST of FC931238 vs. ExPASy Swiss-Prot
Match: SYP52_ARATH (Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 4.145e-80 Identity = 148/195 (75.90%), Postives = 174/195 (89.23%), Query Frame = 3 Query: 147 MASASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKN 731 MAS+SD W++EYNEA+KL++DINGM+SER++ +GP++QR ASAIRRKITILGTRLDSLQSLL K+PGKQ +SEKEMNRRKDM+ NLRSK NQ+AS LNMSNFANRDSL G ++K D +NR +G+DNQG+V FQRQ+MREQDEGLEKLEETV+STKHIALAVNEEL L TRLIDDLD VD+TDSRLRRVQK+ Sbjct: 1 MASSSDPWMREYNEALKLSEDINGMMSERNASGLTGPDAQRRASAIRRKITILGTRLDSLQSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLRRVQKS 195
BLAST of FC931238 vs. ExPASy Swiss-Prot
Match: STX8B_DICDI (Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16 Identity = 62/204 (30.39%), Postives = 104/204 (50.98%), Query Frame = 3 Query: 162 DSWIKEYNEAIKLADDINGMISERSSMPASGPES-QRHASA-IRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLN--MSNFANRDSLLGPEIK-SADVMNRATG----------LDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQK 728 D W+ E++ +KL + + I E S + P Q++ A +R + + + LQ L+ + I EKE+ RRK+ + +L S NQ+ STL+ ++N + ++ L+G NR G DNQ L Q+ IMREQDE L+ L ++++ K++A A++ ELD H ++DD++ D RLR + Sbjct: 3 DYWLNEHDNIVKLINSLTADIKEYSIQQRNNPGIVQKNTPAKLRNGLVHITNEILRLQDSLT-YGNNRNIQEKELLRRKNKVESLISMKNQLNSTLDAAINNTSQKNELMGNNNGVGIGYSNRQFGKPKETEATKQFDNQQLFTNQQHIMREQDESLDLLSQSIMRQKNMAHAMSNELDQHNEMLDDVEIGTDAVSMRLRNANR 205
BLAST of FC931238 vs. ExPASy Swiss-Prot
Match: STX8_RAT (Syntaxin-8 OS=Rattus norvegicus GN=Stx8 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12 Identity = 54/202 (26.73%), Postives = 94/202 (46.53%), Query Frame = 3 Query: 156 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLR 716 A D W Y+ ++A +I I ER+ G ++ + IR + L ++D L+ LL + + I++ E +RR+++L +L ++ L +++F N R SL+ E K + GL + Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQERNQCERRGEKTPKLTLTIRTLLKNLKVKIDLLKDLLLRAVSTRQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGSEPDLIRSSLMSEEAKRGTPNPWLCEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 198
BLAST of FC931238 vs. ExPASy Swiss-Prot
Match: STX8_MOUSE (Syntaxin-8 OS=Mus musculus GN=Stx8 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12 Identity = 54/202 (26.73%), Postives = 94/202 (46.53%), Query Frame = 3 Query: 156 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLR 716 A D W Y+ ++A +I I ER+ G ++ + IR + L ++D L+ LL + + I++ E +RR+++L +L ++ L +++F N R SL+ E K + GL + Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQERNQCERRGEKTPKLTLTIRTLLKNLKVKIDLLKDLLLRAVSTRQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGAEPDLIRSSLMSEEAKRGTPNPWLCEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 198
BLAST of FC931238 vs. ExPASy Swiss-Prot
Match: STX8_HUMAN (Syntaxin-8 OS=Homo sapiens GN=STX8 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11 Identity = 52/202 (25.74%), Postives = 92/202 (45.54%), Query Frame = 3 Query: 156 ASDSWIKEYNEAIKLADDINGMISERSSMPASGPESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFAN--------RDSLLGPEIKSA-------DVMNRATGLDNQGLVGFQRQIMREQDEGLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLR 716 A D W Y+ ++A +I I +R+ G ++ + IR + L ++ L+ LL + I++ E +RR+++L +L ++ L +++F N R SL+ E K + GL + Q++I++EQD GL+ L + K + + ELD +IDDL V+ TD +LR Sbjct: 2 APDPWFSTYDSTCQIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTR-----ERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 198 The following BLAST results are available for this feature:
BLAST of FC931238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931238 ID=FC931238; Name=FC931238; organism=Citrus clementina; type=EST; length=736bpback to top |