FC931241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931241 vs. ExPASy Swiss-Prot
Match: U4977_ARATH (UPF0497 membrane protein At2g28370 OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 5.489e-73 Identity = 136/175 (77.71%), Postives = 152/175 (86.86%), Query Frame = 3 Query: 237 MNVSHASVHPVEDPPT--TEGGNAPRVRMKDIQGMPATPGGLALRVSQFIFAVAALCVMATTSDFPSVTAFCFLVAAAGLQSLWSLSLAIVDIYALSVMRSLQNSRIVNLFTVGDGITSTLTFAAACASAGITVLIDNDLQSCSQNHCIQFETXTAMAFISWFTALPSFLVNFGS 755 MNVSHASVHPVEDPP TE N PRVRM D++GMP T GLALR QF+FA AALCVMA+TSDFPSVTAFC+LVAA GLQSLWSL+LA+VD+YA+ V RSLQN R+V+LF +GDG+TSTLTFAAACASAGITVLIDNDL SC+QNHC+QFET TA+AFISWF ALPSFL NF S Sbjct: 1 MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWS 175
BLAST of FC931241 vs. ExPASy Swiss-Prot
Match: U497B_ARATH (UPF0497 membrane protein At2g37200 OS=Arabidopsis thaliana GN=At2g37200 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 8.804e-55 Identity = 112/176 (63.64%), Postives = 130/176 (73.86%), Query Frame = 3 Query: 237 MNVSHASVHPVEDPPTTEGGNA---PRVRMKDIQGMPATPGGLALRVSQFIFAVAALCVMATTSDFPSVTAFCFLVAAAGLQSLWSLSLAIVDIYALSVMRSLQNSRIVNLFTVGDGITSTLTFAAACASAGITVLIDNDLQSCSQNHCIQFETXTAMAFISWFTALPSFLVNFGS 755 MNVS ++HPV+ P A P VRMKD+QGMP T GGL LR+SQF+ A+ ++ VM TTSDF S TAFC LV A LQSLWSLSL I+D YAL V RSL+N +V FT+GDG+TSTLTFAAA ASAGITVLI NDL C+ NHC +FET TAMAFISWF PSF++NF S Sbjct: 2 MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWS 176
BLAST of FC931241 vs. ExPASy Swiss-Prot
Match: U497J_ARATH (UPF0497 membrane protein At3g23200 OS=Arabidopsis thaliana GN=At3g23200 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.852e-29 Identity = 69/143 (48.25%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 315 MKDIQGMPATPGGLALRVSQFIFAVAALCVMATTSDFPSVTAFCFLVAAAGLQSLWSLSLAIVDIYALSVMRSLQNSRIVNLFTVGDGITSTLTFAAACASAGITVLIDNDLQSCS-QNHCIQFETXTAMAFISWFTALPSFL 740 M DI G P T GL LR+SQ +FA ++ M T+ F S TAFC+L+AA GLQ +WS LAI+D +AL ++L + +V+LF VGD +TSTL+ A A +SAGITVL DL SCS + C +++ A+AF+ W T S L Sbjct: 1 MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGLAILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAECWKYQLSVALAFLCWITIAVSSL 143
BLAST of FC931241 vs. ExPASy Swiss-Prot
Match: U497L_ARATH (UPF0497 membrane protein At3g53850 OS=Arabidopsis thaliana GN=At3g53850 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.353e-29 Identity = 65/148 (43.92%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 315 MKDIQGMPATPGGLALRVSQFIFAVAALCVMATTSDFPSVTAFCFLVAAAGLQSLWSLSLAIVDIYALSVMRSLQNSRIVNLFTVGDGITSTLTFAAACASAGITVLIDNDLQSC---SQNHCIQFETXTAMAFISWFTALPSFLVNF 749 MK + G P T GL LR+ Q A A++ VM + +F TAFC+L+A+ GLQ LWS LA +D+YAL + LQN +V+LF VGD +T+ L+ AAAC+SAG+ VL + D++ C SQ C+++E A++F++W S V F Sbjct: 1 MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGLACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQYPCLRYEVAVALSFVTWIQIAVSSHVTF 148
BLAST of FC931241 vs. ExPASy Swiss-Prot
Match: U497X_ARATH (UPF0497 membrane protein At5g02060 OS=Arabidopsis thaliana GN=At5g02060 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.198e-27 Identity = 62/140 (44.29%), Postives = 89/140 (63.57%), Query Frame = 3 Query: 315 MKDIQGMPATPGGLALRVSQFIFAVAALCVMATTSDFPSVTAFCFLVAAAGLQSLWSLSLAIVDIYALSVMRSLQNSRIVNLFTVGDGITSTLTFAAACASAGITVLIDNDLQSCSQN---HCIQFETXTAMAFISWFTA 725 MK + G P T GL LR+ Q A A++ VM ++ DF + TAFCFLVA+ GLQ +WS LA +D+YA+ L++ +++LFTVGD +T+ L AAAC+SAG+TVL D + C Q C +F+ ++F +WF A Sbjct: 1 MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGLACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPALSCDRFQISVGLSFFNWFLA 140
BLAST of FC931241 vs. ExPASy Swiss-Prot
Match: U497K_ARATH (UPF0497 membrane protein At3g50810 OS=Arabidopsis thaliana GN=At3g50810 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.564e-19 Identity = 53/148 (35.81%), Postives = 78/148 (52.70%), Query Frame = 3 Query: 315 MKDIQGMPATPGGLALRVSQFIFAVAALCVMATTSDFPSVTAFCFLVAAAGLQSLWSLSLAIVDIYALSVMRSLQNSRIVNLFTVGDGITSTLTFAAACASAGITVLIDN-DLQSCSQNHCIQFETXTAMAFISWFTALPSFLVNFGS 755 M+ + G T ALR Q IF+ A+L M DF T FC+L + + WS+ LA+ D Y++ V Q R++++ GD + S L+ ACA A T L+ + D + C + CIQ++ A+AF+ WF L S L NF S Sbjct: 1 MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILLALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSLCIQYQVSAALAFLCWFLLLASALFNFWS 148
BLAST of FC931241 vs. ExPASy Swiss-Prot
Match: U4974_ARATH (Putative UPF0497 membrane protein At1g49405 OS=Arabidopsis thaliana GN=At1g49405 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.960e-19 Identity = 47/144 (32.64%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 315 MKDIQGMPATPGGLALRVSQFIFAVAALCVMATTSDFPSVTAFCFLVAAAGLQSLWSLSLAIVDIYALSVMRSLQNSRIVNLFTVGDGITSTLTFAAACASAGITVLIDNDLQSCSQNHCIQFETXTAMAFISWFTALPSFLVN 746 M ++ G T L+LR+ Q + A +L M F TAFC+LV L W+L+LA+VDIY + + + Q RI+ ++GD + S L A+A ++A + ++ ++ SC C +++ +AF++WF +L S L N Sbjct: 1 MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTLAMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDILRSNESSCPPTICNRYQFAATLAFLTWFLSLSSSLFN 144
BLAST of FC931241 vs. ExPASy Swiss-Prot
Match: U497W_ARATH (UPF0497 membrane protein At4g37235 OS=Arabidopsis thaliana GN=At4g37235 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.984e-14 Identity = 42/138 (30.43%), Postives = 73/138 (52.90%), Query Frame = 3 Query: 342 TPGGLALRVSQFIFAVAALCVMATTSD--FPSVTAFCFLVAAAGLQSLWSLSLAIVDIYALSVMRSLQNSRIVNLFTVGDGITSTLTFAAACASAGITVLIDNDLQSCSQNHCIQFETXTAMAFISWFTALPSFLVNF 749 T LR+ Q +F+ A+L M D F + T FC+LV GL + WS++LA+++ Y++ V + + ++++ GD + S L+ AC++A + VL L + C +++ MAF+S F + S NF Sbjct: 10 TSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSVTLALMEAYSILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVL----LMDAGEKQCDRYKLSATMAFLSSFLSFASTFFNF 143 The following BLAST results are available for this feature:
BLAST of FC931241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931241 ID=FC931241; Name=FC931241; organism=Citrus clementina; type=EST; length=786bpback to top |