FC931280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931280 vs. ExPASy Swiss-Prot
Match: COG5_HUMAN (Conserved oligomeric Golgi complex subunit 5 OS=Homo sapiens GN=COG5 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 9.188e-35 Identity = 90/239 (37.66%), Postives = 131/239 (54.81%), Query Frame = 3 Query: 3 SVTSLFQAMIDRLESCILQIHDQNFS-VLGMDATMDNNASPYMEELQKCILHFRSEFLSRLLPSSASXXXXXXXXXXXRLVRSMASRVLIFFIRHASFVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPLLQD-LPPSVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQ-GEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQL 710 +V L ++ D +E+ I+ +H ++FS L D S YM+ELQ I S++ ++A R + FIRHAS +RPL E GK+R+A D A++ELAVG V LG YR LR+FRPL+F + + +SP L D +P S+I+ L++R P EL+SP QR + + ++S WLD E I+ L+ Y VR+R KEF+PVYP+M+QL Sbjct: 602 AVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVPCSLYMKELQGFIARVMSDYFKHF----------ECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKMRLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIIIQFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIRGALEAYVQSVRSREGKEFAPVYPIMVQL 830
BLAST of FC931280 vs. ExPASy Swiss-Prot
Match: COG5_MOUSE (Conserved oligomeric Golgi complex subunit 5 OS=Mus musculus GN=Cog5 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.042e-33 Identity = 85/239 (35.56%), Postives = 129/239 (53.97%), Query Frame = 3 Query: 3 SVTSLFQAMIDRLESCILQIHDQNFS-VLGMDATMDNNASPYMEELQKCILHFRSEFLSRLLPSSASXXXXXXXXXXXRLVRSMASRVLIFFIRHASFVRPLSESGKLRMARDMAELELAVGQNLFPVEQLGAPYRALRAFRPLIFLETSQLGASPLLQDLPP-SVILHHLYSRGPDELQSPLQRNKLTPLQYSLWLDSQ-GEDQIWKGIKATLDDYAAKVRARGDKEFSPVYPLMLQL 710 ++ L ++ D +E+ I+ +H ++FS D S YM+ELQ I +++ ++A R + FIR+AS +RPL E GKLR+A D A++ELAVG V LG YR LR+FRPL+F + + SP + D+ P S+I+ L++R P EL+SP QR + + ++S WLD E ++ L+ Y VR+R KEF+PVYP+M+QL Sbjct: 592 AIQPLLTSVADAIEAIIITMHQEDFSGASSSSGKPDVPCSLYMKELQGFIARVMNDYFKHF----------ECMDFVFDNTEAIAQRAIELFIRNASLIRPLGEGGKLRLAADFAQMELAVGPLCRRVSDLGKSYRMLRSFRPLLFQTSEHVADSPAVGDIIPFSIIIQFLFTRAPAELKSPFQRAEWSHARFSQWLDDHPSEKDRLLLLRGALEAYVQSVRSRDGKEFAPVYPIMVQL 820 The following BLAST results are available for this feature:
BLAST of FC931280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931280 ID=FC931280; Name=FC931280; organism=Citrus clementina; type=EST; length=740bpback to top |