FC931884
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.546e-63 Identity = 116/197 (58.88%), Postives = 131/197 (66.50%), Query Frame = 2 Query: 101 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGE-----CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC-RGKYY-GRGPIQLSWNYNYLRC 649 GSA CG +CPGG CCS +GWCG T DYC GCQS C+ G+ CD D GDG G L II + F+ LL++RND RCPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HETTGGWPDAP G YAWGYC+ +E+ YCDP NY C GK Y GRGPIQLSWNYNY C Sbjct: 20 GSAEQCGRQAGDALCPGGLCCSSYGWCGTTVDYCGIGCQSQCDGGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLC 214 HSP 2 Score: 35.039 bits (79), Expect = 1.546e-63 Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +++ P+ TDPV+SFK +IWFW Sbjct: 222 LLQEPELVETDPVISFKTAIWFW 244
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.873e-62 Identity = 107/187 (57.22%), Postives = 128/187 (68.45%), Query Frame = 2 Query: 101 GSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNY 640 GSA CG G VCPGG CCS+FGWCG T DYC GCQS C+ G++G++I+R MF D+L++RN+ CP + FYTYDAFI AAKAFP FG +G+ T RKREIAAF AQT HETTGGW AP G YAWGYC+ RE G+ + YC P+ +PC KYYGRGPIQ+S+NYNY Sbjct: 18 GSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSST---------------GDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPCAAGRKYYGRGPIQISYNYNY 188 HSP 2 Score: 34.6538 bits (78), Expect = 4.873e-62 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 +V +PD ATD V+SFK + WFW Sbjct: 199 LVNNPDLVATDAVISFKTAFWFW 221
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.176e-60 Identity = 112/194 (57.73%), Postives = 134/194 (69.07%), Query Frame = 2 Query: 101 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCE--GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRC 649 GSA CG G +CPGG CCS+FGWCG T DYC + GCQS C+ G+ GD G L +I+R+ F+ +L +RND CPAR FYTYDAFI AAK+FPAF +G++ RKRE+AAF AQT HETTG GW AP G Y WGYC+NRE+ A DYC DPNYPC GK Y+GRGP+QL+WNYNY +C Sbjct: 19 GSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCS-----------GSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQC 198 HSP 2 Score: 34.2686 bits (77), Expect = 1.176e-60 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDP +SFK + WFW Sbjct: 206 LLNNPDLLATDPTISFKSAFWFW 228
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 4.432e-60 Identity = 101/182 (55.49%), Postives = 121/182 (66.48%), Query Frame = 2 Query: 110 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLSWNYNYLRC 649 G G +CPGG CCS+FGWCG TTDYC GCQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ+SWNYNY +C Sbjct: 31 GRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCG-----------GPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC 201 HSP 2 Score: 32.7278 bits (73), Expect = 4.432e-60 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ PD ATD V+SFK ++WFW Sbjct: 209 LLNKPDLVATDSVISFKSALWFW 231
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 4.433e-60 Identity = 100/187 (53.48%), Postives = 124/187 (66.31%), Query Frame = 2 Query: 104 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPIQLSWNYNYLRC 649 SA CG+ G +CPGG CCS+FGWCG T++YC +GCQS C+ G++G GG L +IS F ++L++RND C + FYTYDAF+ AAKAFP F N G+ +KREIAAF QT HETTGGWP AP G YAWGYCF RE ++ +PC +YYGRGPIQ+SWNYNY +C Sbjct: 19 SAEQCGTQAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCS-----------GSSG-GGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQC 193 HSP 2 Score: 37.3502 bits (85), Expect = 4.433e-60 Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDPV+SFK ++WFW Sbjct: 201 LLNNPDLVATDPVISFKTALWFW 223
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 5.778e-60 Identity = 109/190 (57.37%), Postives = 127/190 (66.84%), Query Frame = 2 Query: 104 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRC 649 SA CGS G CP G CCS+FGWCG T DYC G CQS C G P T GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C Sbjct: 22 SAEQCGSQAGGARCPSGLCCSKFGWCGNTNDYCGPGNCQSQCP----GGPTPTPPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC 206 HSP 2 Score: 36.5798 bits (83), Expect = 5.778e-60 Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ATDPV+SFK ++WFW Sbjct: 214 LLNNPDLVATDPVISFKSALWFW 236
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 2.177e-59 Identity = 100/182 (54.95%), Postives = 121/182 (66.48%), Query Frame = 2 Query: 110 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLSWNYNYLRC 649 G G +CPGG CCS+FGWCG TTDYC + CQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ+SWNYNY +C Sbjct: 30 GRQAGGALCPGGNCCSQFGWCGSTTDYCGKDCQSQCG-----------GPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC 200 HSP 2 Score: 32.7278 bits (73), Expect = 2.177e-59 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ PD ATD V+SFK ++WFW Sbjct: 208 LLNKPDLVATDSVISFKSALWFW 230
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.839e-59 Identity = 114/193 (59.07%), Postives = 131/193 (67.88%), Query Frame = 2 Query: 101 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCC-EGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRC 649 GSA CG G +CPGG CCS+FGWCG T DYC GCQS C+ G A G L +ISR+ F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTG GW AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QLSWNYNY +C Sbjct: 20 GSAEQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQC 201 HSP 2 Score: 31.5722 bits (70), Expect = 2.839e-59 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD ++DP +SFK + WFW Sbjct: 209 LLNNPDLLSSDPTISFKSAFWFW 231
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 4.827e-59 Identity = 105/185 (56.76%), Postives = 123/185 (66.49%), Query Frame = 2 Query: 110 GNCGSGVVCPGGECCSRFGWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRC 649 G G +CP G CCS FGWCG T YC + GCQS C G P G G+L IISR F+D+L++RND CPAR FYTYDAFI AAK+FP FG +G+ RK+EIAAFF QT HETTGGW AP G Y+WGYCF +E SS+YC P+ +PC YYGRGP+QLSWNYNY +C Sbjct: 24 GRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQC-----GGTPP-----GPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQN-PSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQC 197 HSP 2 Score: 33.8834 bits (76), Expect = 4.827e-59 Identity = 11/23 (47.83%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD + DPV++FK +IWFW Sbjct: 205 LLNNPDLVSNDPVIAFKAAIWFW 227
BLAST of FC931884 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 217.238 bits (552), Expect = 6.290e-59 Identity = 105/190 (55.26%), Postives = 126/190 (66.32%), Query Frame = 2 Query: 104 SAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRC 649 SA CG G +CP G CCS FGWCG T YC + GCQS +C P G G+L IIS F+D+L++RND CPAR FYTY+AFI AAK+FP FG +G+ RK+E+AAFF QT HETTGGW AP G Y+WGYCF +E A SDYC+P+ +PC +YYGRGP+QLSWNYNY C Sbjct: 32 SAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQS--------QCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLC 212 HSP 2 Score: 31.9574 bits (71), Expect = 6.290e-59 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 676 VVEHPDPSATDPVLSFKVSIWFW 744 ++ +PD A D V++FK +IWFW Sbjct: 220 LLNNPDLVANDAVIAFKAAIWFW 242 The following BLAST results are available for this feature:
BLAST of FC931884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931884 ID=FC931884; Name=FC931884; organism=Citrus clementina; type=EST; length=744bpback to top |