BQ623041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 5.647e-68 Identity = 122/152 (80.26%), Postives = 130/152 (85.53%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 456 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVR W LVNSKE P+FEQP+MT++KLL YG M+VQEQENVKRVQLADKY+SEAALG+AN DAI+ G FYG Sbjct: 286 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437 HSP 2 Score: 28.1054 bits (61), Expect = 5.647e-68 Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 491 GGKAAQQM-NGPVPEGC 538 GG+AAQQ+ N PVPEGC Sbjct: 437 GGQAAQQVGNVPVPEGC 453
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.837e-67 Identity = 124/152 (81.58%), Postives = 133/152 (87.50%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 456 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYLSEAALG+AN+DA+ +G FYG Sbjct: 286 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 5.915e-65 Identity = 118/152 (77.63%), Postives = 132/152 (86.84%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 456 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVR W LVNS+E PTF+QP+MT+EKL+EYG+M+VQEQENVKRVQLADKYLSEAALG+AN DA+++G FYG Sbjct: 273 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 242.662 bits (618), Expect = 2.116e-64 Identity = 114/152 (75.00%), Postives = 133/152 (87.50%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 456 DFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVR W LVNS+E P FEQP+MT+EKL+EYG M+V+EQENVKRVQLA++YLSEAALG+AN+DA+++G+FYG Sbjct: 277 DFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 428 HSP 2 Score: 23.0978 bits (48), Expect = 2.116e-64 Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 494 GKAAQQM-NGPVPEGC 538 G+ AQQ N PVPEGC Sbjct: 428 GQGAQQAGNLPVPEGC 443
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.759e-64 Identity = 112/152 (73.68%), Postives = 132/152 (86.84%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 456 DFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRARVYDDEVR W LVNS++ TFEQP+MT+EKLLEYG+M+VQEQ+NVKRVQLAD Y+S+AALG+AN DA+++G+FYG Sbjct: 276 DFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427 HSP 2 Score: 26.1794 bits (56), Expect = 2.759e-64 Identity = 11/15 (73.33%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 494 GKAAQQMNGPVPEGC 538 GK AQQ PVPEGC Sbjct: 427 GKGAQQGTLPVPEGC 441
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 234.958 bits (598), Expect = 3.598e-64 Identity = 115/152 (75.66%), Postives = 124/152 (81.58%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 456 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGALRARVYDDEVR + LVNS+E P FEQP MT EKL+EYGNM+V EQENVKRVQLA+ YLS+AALG+ANADAI G FYG Sbjct: 286 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437 HSP 2 Score: 30.0314 bits (66), Expect = 3.598e-64 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 494 GKAAQQMNGPVPEGC 538 GK AQQ+N PVPEGC Sbjct: 437 GKGAQQVNLPVPEGC 451
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 5.007e-64 Identity = 117/150 (78.00%), Postives = 129/150 (86.00%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNF 450 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVR W LVNSKE PTFEQP+MT++KLL+YGNM+V+EQENVKRVQLADKY+SEAALG+AN DAI+ G F Sbjct: 286 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 242.662 bits (618), Expect = 8.541e-64 Identity = 115/151 (76.16%), Postives = 130/151 (86.09%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 453 DFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE PTF+QP+M+++KLL+YGNM+VQEQENVKRVQLADKYL+EAALG AN DAI+SG+F+ Sbjct: 288 DFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 2.485e-63 Identity = 116/151 (76.82%), Postives = 128/151 (84.77%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 453 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR DNV +D+VK+VD FPGQSIDFFGALRARVYDDEVR W L+NS + PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYL EAALG+ANADAI +G+F+ Sbjct: 290 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 4.239e-63 Identity = 115/150 (76.67%), Postives = 128/150 (85.33%), Query Frame = 1 Query: 1 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNF 450 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRARVYDDEVR W L+NS + PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLA+ YL EAALG+ANADAI +GNF Sbjct: 290 DFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439 The following BLAST results are available for this feature:
BLAST of BQ623041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623041 ID=BQ623041; Name=BQ623041; organism=Citrus sinensis; type=EST; length=539bpback to top |