BQ623188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 3.657e-85 Identity = 121/142 (85.21%), Postives = 124/142 (87.32%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYR+ AFDPLGLADDPD FAELK Sbjct: 67 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELK 208 HSP 2 Score: 73.9442 bits (180), Expect = 3.657e-85 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY+ Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYL 67 HSP 3 Score: 32.7278 bits (73), Expect = 3.657e-85 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 208 KVKELKNGRLAMFSMF 223
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 3.657e-85 Identity = 121/142 (85.21%), Postives = 124/142 (87.32%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYR+ AFDPLGLADDPD FAELK Sbjct: 67 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELK 208 HSP 2 Score: 73.9442 bits (180), Expect = 3.657e-85 Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSY+ Sbjct: 35 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYL 67 HSP 3 Score: 32.7278 bits (73), Expect = 3.657e-85 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 208 KVKELKNGRLAMFSMF 223
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 6.716e-84 Identity = 122/142 (85.92%), Postives = 124/142 (87.32%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYR+ AFDPLGLADDPD FAELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELK 210 HSP 2 Score: 68.1662 bits (165), Expect = 6.716e-84 Identity = 29/33 (87.88%), Postives = 31/33 (93.94%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTVKSAP SIWYGPDRPKYLGPFS+Q PSY+ Sbjct: 37 MRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYL 69 HSP 3 Score: 31.9574 bits (71), Expect = 6.716e-84 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 210 KVKEIKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 8.750e-84 Identity = 119/142 (83.80%), Postives = 124/142 (87.32%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYR+ AFDPLGLADDP+ FAELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELK 210 HSP 2 Score: 70.8626 bits (172), Expect = 8.750e-84 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSY+ Sbjct: 37 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYL 69 HSP 3 Score: 31.9574 bits (71), Expect = 8.750e-84 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 210 KVKEIKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 1.606e-82 Identity = 117/142 (82.39%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+L KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYR+ AFDPLGLADDPD FAELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELK 210 HSP 2 Score: 70.4774 bits (171), Expect = 1.606e-82 Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSY+ Sbjct: 37 MRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYL 69 HSP 3 Score: 32.7278 bits (73), Expect = 1.606e-82 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 210 KVKELKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 3.552e-82 Identity = 118/142 (83.10%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYR+ AFDPLGLADDP+ FAELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELK 210 HSP 2 Score: 70.8626 bits (172), Expect = 3.552e-82 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSY+ Sbjct: 37 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYL 69 HSP 3 Score: 31.9574 bits (71), Expect = 3.552e-82 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 210 KVKEIKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 4.635e-82 Identity = 118/142 (83.10%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMGFVEGYR+ AFDPLGLADDP+ FAELK Sbjct: 41 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELK 182 HSP 2 Score: 70.8626 bits (172), Expect = 4.635e-82 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSY+ Sbjct: 9 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYL 41 HSP 3 Score: 31.9574 bits (71), Expect = 4.635e-82 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 182 KVKEIKNGRLAMFSMF 197
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 7.854e-82 Identity = 116/142 (81.69%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSILA+WA QVVLMG +EGYR+ AFDPLGLADDP+ FAELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELK 210 HSP 2 Score: 70.8626 bits (172), Expect = 7.854e-82 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTVKSAPQSIWYG DRPKYLGPFSEQTPSY+ Sbjct: 37 MRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYL 69 HSP 3 Score: 31.9574 bits (71), Expect = 7.854e-82 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 210 KVKEIKNGRLAMFSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 5.002e-81 Identity = 116/142 (81.69%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+FPE+LSKNGV+FGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMG +EGYR+ AFDPLGLADDP+ FAELK Sbjct: 68 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELK 209 HSP 2 Score: 66.6254 bits (161), Expect = 5.002e-81 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTVK+ PQSIWYG DRPK+LGPFSEQTPSY+ Sbjct: 36 MRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYL 68 HSP 3 Score: 31.9574 bits (71), Expect = 5.002e-81 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 209 KVKEIKNGRLAMFSMF 224
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 9.173e-80 Identity = 113/142 (79.58%), Postives = 120/142 (84.51%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCVFPE+L+KNG+KFGEAVWFKAGAQIFSEGGLDY GNPNLIHAQSILAIWACQVVLMG +EGYR+ AFDPLGLADDP+ AELK Sbjct: 70 LTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELK 211 HSP 2 Score: 68.9366 bits (167), Expect = 9.173e-80 Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 2 Query: 2 MRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MRRTV+SAP+SIWYGPDRPKYLGPFSE TPSY+ Sbjct: 38 MRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYL 70 HSP 3 Score: 31.9574 bits (71), Expect = 9.173e-80 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 211 KVKEIKNGRLAMFSMF 226 The following BLAST results are available for this feature:
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623188 ID=BQ623188; Name=BQ623188; organism=Citrus sinensis; type=EST; length=576bpback to top |