BQ623408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623408 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 8.248e-35 Identity = 89/177 (50.28%), Postives = 113/177 (63.84%), Query Frame = 1 Query: 7 LNDFDYPNSFQNH-HSAGMDSVVPVQT-TKPEXXXXXXXXXXXLINNENCFDIDFCRSKLXXXXXXXXXXXXXX----LDVGVVPDGNSMSDISYTFGRNMSTGSGADPSVTVSAPGANQASQLCGIDREARVLRYREKRKNRKFEKTIRYHSRKAYAETRPRIKGRFAKRAEADSE 519 L DF++PNSF +H ++AG DS+VPVQT T+P L NN++CFDIDFCRSKL ++ GVVPDGN+ + ++ + + +TG G +QAS + DREARVLRYREKRKNRKFEKTIRY SRKAYAE+RPRIKGRFAKR E +++ Sbjct: 182 LIDFEFPNSFNHHQNNAGGDSLVPVQTKTEP----------LPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVSTSSIEYGVVPDGNTNNSVNRSTITSSTTG------------GDHQASSM---DREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETEND 333
BLAST of BQ623408 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.384e-28 Identity = 79/181 (43.65%), Postives = 96/181 (53.04%), Query Frame = 1 Query: 13 DFDYPN-----SFQNHHSAGMDSVVPVQTTKPEXXXXXXXXXXXLINNENCFDIDFCRSKLXXXXXXXXXXXXXX-----LDVGVVPDGNSMSDISYTFGRNMSTGSGADPSVTVSAPGANQASQLCGIDREARVLRYREKRKNRKFEKTIRYHSRKAYAETRPRIKGRFAKRAEADSEVD 525 D DY N +S+G D VVPV+ NENCF++DF ++VGVVPDG S++D+SY +G + SGADP G +A L +REARV+RYREKRKNRKFEKTIRY SRKAYAE RPRIKGRFAKR + + D Sbjct: 184 DLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRIPTV----------NENCFEMDFTGGSKGFTYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPAT--SGADP-------GTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESND 345
BLAST of BQ623408 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20 Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 223 LDVGVVPDGNSMSDISYTFGRNMSTGSGADPSVTVSAPGANQASQLCGIDREARVLRYREKRKNRKFEKTIRYHSRKAYAETRPRIKGRFAKRAEADSEVDRLY 534 +D+ VVP+ + SDI+ R +T D +S P QL ++REARVLRYREK+K RKF+KTIRY SRKAYAE RPRIKGRFAKR E ++E + ++ Sbjct: 234 MDISVVPESTA-SDITVQHPR--TTKETIDQ---LSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIF 331
BLAST of BQ623408 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 71/171 (41.52%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 10 NDFDYPNS--FQNHHSAGMDSVVPVQTTKPEXXXXXXXXXXXLINNENCFDIDFCRSKLXXXXXXXXXXXXXX--LDVGVVPDGNSMSDISYTFGRNMSTGSGADPSVTVSAPGANQASQLCGIDREARVLRYREKRKNRKFEKTIRYHSRKAYAETRPRIKGRFAKRAEA 510 +D DYP +S+G D VVPVQ L NE+ F+ D SK+ +DV +VP+ S G A+ + T + A QL +REARVLRYREKRKNRKFEKTIRY SRKAYAE RPRIKGRFAKR ++ Sbjct: 138 SDLDYPKIEVTSEENSSGNDGVVPVQNK--------------LFLNEDYFNFDLSASKISQQGFNFINQTVSTRTIDVPLVPE---------------SGGVTAEMTNTETP-----AVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274
BLAST of BQ623408 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 53/104 (50.96%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 223 LDVGVVPDGNSMSDISYTFGRNMSTGSGADPSVTVSAPGANQASQLCGIDREARVLRYREKRKNRKFEKTIRYHSRKAYAETRPRIKGRFAKRAEADSEVDRLY 534 +D+GVVP+ + SD + + R+ P P A L DREARVLRYREK+K RKFEKTIRY SRKAYAE RPRIKGRFAK+ + D E ++ + Sbjct: 245 MDLGVVPESTT-SDATVSNPRS--------PKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAF 339
BLAST of BQ623408 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 50/93 (53.76%), Postives = 57/93 (61.29%), Query Frame = 1 Query: 223 LDVGVVPDGNSMSDISYTFGRNMSTGSGADPSVTVSAPGANQASQLCGIDREARVLRYREKRKNRKFEKTIRYHSRKAYAETRPRIKGRFAKR 501 ++ GVVP+ S T + T G A +QL +DREARVLRYREKRK RKFEKTIRY SRKAYAE RPR+ GRFAKR Sbjct: 260 METGVVPE----STACVTTASHPRTPKGTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348 The following BLAST results are available for this feature:
BLAST of BQ623408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623408 ID=BQ623408; Name=BQ623408; organism=Citrus sinensis; type=EST; length=695bpback to top |