BQ623414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.152e-63 Identity = 102/112 (91.07%), Postives = 109/112 (97.32%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 411 +YGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSRINMTCVNH+TGVV+ KKFG+L NWQR+YTMEDILTQLKKEMAA HNRKLVQPPEGT+F Sbjct: 34 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEMAASHNRKLVQPPEGTFF 145 HSP 2 Score: 37.3502 bits (85), Expect = 1.152e-63 Identity = 17/23 (73.91%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 2 VVPRNFRXXXXXXRGEKGIGDGT 70 VVPRNFR RGEKGIGDGT Sbjct: 10 VVPRNFRLLEELERGEKGIGDGT 32
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 5.658e-63 Identity = 101/112 (90.18%), Postives = 106/112 (94.64%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 411 +YGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NM CVNHETGVV+PKKFGLL NWQREYTMEDIL QLKKEM+ HNRKLVQPPEGT F Sbjct: 35 SYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 146 HSP 2 Score: 37.3502 bits (85), Expect = 5.658e-63 Identity = 17/23 (73.91%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 2 VVPRNFRXXXXXXRGEKGIGDGT 70 VVPRNFR RGEKGIGDGT Sbjct: 11 VVPRNFRLLEELERGEKGIGDGT 33
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.692e-49 Identity = 80/109 (73.39%), Postives = 92/109 (84.40%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 402 +YGMDD DDIYM+SWTGTI+GP NT +EG+I+QLKLFC K+YPE PP+VRF +RINM CVN ETGVVEP F +L NW+REYTMEDIL +LKKEM HNRKL QPPEG Sbjct: 33 SYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMTSHNRKLAQPPEG 141 HSP 2 Score: 37.3502 bits (85), Expect = 1.692e-49 Identity = 17/23 (73.91%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 2 VVPRNFRXXXXXXRGEKGIGDGT 70 VVPRNFR RGEKGIGDGT Sbjct: 9 VVPRNFRLLEELERGEKGIGDGT 31
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 3.388e-47 Identity = 77/109 (70.64%), Postives = 90/109 (82.57%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 402 +YGMDD DDI M+SWTGTI+GPHNT +EG+I+QLKLFC KDYPE PP+VRF SRINM CVN E GVV+P F +L NW+RE+TMED+L QLKKEM + NRKL QP EG Sbjct: 33 SYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMSSQNRKLAQPLEG 141 HSP 2 Score: 37.3502 bits (85), Expect = 3.388e-47 Identity = 17/23 (73.91%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 2 VVPRNFRXXXXXXRGEKGIGDGT 70 VVPRNFR RGEKGIGDGT Sbjct: 9 VVPRNFRLLEELERGEKGIGDGT 31
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: UBE2V_DICDI (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=ube2v PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 3.315e-34 Identity = 60/112 (53.57%), Postives = 84/112 (75.00%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 411 +YG++ DDI + SW GTIIGP NT + R Y LKL+CDKDYP KPP+VRF ++IN+ CVN + GVV+PK +L NW + +++IL++L++EM++ N+KLVQPPEG F Sbjct: 27 SYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLYCDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSSSSNKKLVQPPEGANF 138 HSP 2 Score: 25.7942 bits (55), Expect = 3.315e-34 Identity = 11/22 (50.00%), Postives = 12/22 (54.55%), Query Frame = 2 Query: 5 VPRNFRXXXXXXRGEKGIGDGT 70 +PRNF GEK GDGT Sbjct: 4 IPRNFVLLEELESGEKSTGDGT 25
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: MMS2_SCHPO (Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe GN=spm2 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.577e-33 Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 411 +YG+ + DDI + W TI+GP ++VHE RIY LK+ CD +YP+ PP V F SRIN+ V+ ETG V P K L +W+REY+ME +L LKKEMA+ NRKL QPPEG+ F Sbjct: 27 SYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMETVLLDLKKEMASSSNRKLPQPPEGSTF 138 HSP 2 Score: 30.8018 bits (68), Expect = 3.577e-33 Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 2 Query: 5 VPRNFRXXXXXXRGEKGIGDGTC 73 VPRNF+ +GEKG+G+ +C Sbjct: 4 VPRNFKLLEELEKGEKGLGESSC 26
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: MMS2_YEAST (Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae GN=MMS2 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.183e-29 Identity = 58/112 (51.79%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 411 +YG+ D DDI M W GTI+GP ++ HE RIY L + C +YP+ PP V F S+IN+ CVN TG V+ F L +W+R YTME +L L+KEMA P N+KL QP EG F Sbjct: 27 SYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQ-TDFHTLRDWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 137 HSP 2 Score: 29.261 bits (64), Expect = 2.183e-29 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 5 VPRNFRXXXXXXRGEKGIGDGTC 73 VPRNFR +GEKG G +C Sbjct: 4 VPRNFRLLEELEKGEKGFGPESC 26
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: UB2V1_HUMAN (Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.238e-25 Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 402 ++G++D +D+ + WTG IIGP T++E RIY LK+ C YPE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG Sbjct: 34 SWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: UB2V1_BOVIN (Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.238e-25 Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 402 ++G++D +D+ + WTG IIGP T++E RIY LK+ C YPE PP VRF ++INM VN GVV+P+ +L WQ Y+++ +L +L++ M + N KL QPPEG Sbjct: 34 SWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Match: UB2V1_MOUSE (Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.523e-25 Identity = 50/109 (45.87%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 76 AYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLVNWQREYTMEDILTQLKKEMAAPHNRKLVQPPEG 402 ++G++D +D+ + WTG IIGP T++E RIY LK+ C YPE PPSVRF +R+NM+ V+ GVV+P+ +L WQ ++++ IL +L++ M + N KL QPPEG Sbjct: 34 SWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSSNGVVDPRATAVLAKWQNSHSIKVILQELRRLMMSKENMKLPQPPEG 142 The following BLAST results are available for this feature:
BLAST of BQ623414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623414 ID=BQ623414; Name=BQ623414; organism=Citrus sinensis; type=EST; length=671bpback to top |