BQ623496
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.748e-57 Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 2 Query: 8 SWSSPRALNEPAPFVPMMYSPTPGVPSQNSEWNGYQSPLYPQERSVQSAPTYVINNNPLVDNVQIIHQ--PQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYG---LDPP 502 SWSSPR +N +PF+P+M S T GV SQN EWNGYQ+ +Y ER V S T + NN + ++ Q QM EFPERP QPECSY+++TGDCK+K NCKYHHPKNR+PK PP L+DKGLPLRP QN+C+YYSRYGICKFGPAC++DH + P S E ++PP Sbjct: 266 SWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPP 435 HSP 2 Score: 80.8777 bits (198), Expect = 6.054e-15 Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 2 Query: 173 NNPLVDNVQIIHQPQMLVGEFPE-RPGQPECSYFLRTGDCKYKSNCKYHH--PKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPPPSFGDS 520 N+PL QI ++ E + G +C Y+ RTG CKY C+++H PK+ + +P L+ GLPLRPG+ C YY R G CK+G CK++ HPD + G D P G++ Sbjct: 134 NHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAP--ELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFN---HPDPTTIGGTDSPSFRGNN 247
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 1.865e-48 Identity = 90/160 (56.25%), Postives = 114/160 (71.25%), Query Frame = 2 Query: 8 SWSSPRALNEP--APFVPMMYSPTPGVPSQNSEWNGYQ-SPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDAS 478 SWSS R +N APF+P M+ + GV Q S+WNGYQ S YP ERS + +Y +NN+ + +Q QM V EFPERP QPEC+Y+L+TGDCK+K CKYHHPKNR+PK + +DKGLPLRP Q++C++YSRYGICKFGPAC++DH I P S Sbjct: 253 SWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSIPPTFS 412 HSP 2 Score: 85.5001 bits (210), Expect = 2.458e-16 Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 2 Query: 173 NNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPP 502 N+P+ +QI + E E P EC Y+ RTG CKY +C++ H K + L+ GLP+RPG+ C +Y R G CKFG CK++ HPD +A G+D P Sbjct: 125 NHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFN---HPDPTAIGGVDSP 231
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32 Identity = 71/162 (43.83%), Postives = 96/162 (59.26%), Query Frame = 2 Query: 11 WSSPRALNEP-APFVPMMYSPTPGV-PSQNS----EWNGYQ----SPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIH 466 W R +NE PF+ S + G+ P Q EWNGY +P YP Q P IN+ P+ +I Q+ E+PERPGQPEC +F+++G CK++ CKYHHP++ +P P LS GLP++P Q VC+YY RYG+CKFGPAC Y+HP + Sbjct: 347 WPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINH-PMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVP--PAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFN 505 HSP 2 Score: 68.1662 bits (165), Expect = 4.061e-11 Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 2 Query: 239 ERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPP--CTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 E Q EC Y+ G CK+ CKY H + K+ L+ GLPLRPG+ C YY R G CK+ CK+ HP Sbjct: 236 EGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHP 311
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H13_ARATH (Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis thaliana GN=At1g48195 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.297e-32 Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = 2 Query: 230 EFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDH 457 +FPERPG+PECSY+LRTG+C K NCKYHHPKN P P CTL+DKGLPLRPGQ +C +YSR+GIC+ GP CK+DH Sbjct: 5 KFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYSRFGICRSGPTCKFDH 80
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 7.870e-31 Identity = 57/100 (57.00%), Postives = 75/100 (75.00%), Query Frame = 2 Query: 233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPPPSFGDSTTRQ 532 FPERP QPEC ++++TGDCK+ + CK+HHPK RI +P C LS GLPLRPG+ +C++YSRYGICKFGP CK+DHP+ + YGL P+ GD + R+ Sbjct: 306 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPM---GTVMYGLATSPT-GDVSARR 401 HSP 2 Score: 99.7525 bits (247), Expect = 1.259e-20 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 2 Query: 227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 GE+P+R GQPEC Y+L+TG CK+ + CK+HHP+ + + L+ G PLRP + C+YY R G CKFG CK+ HP Sbjct: 96 GEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHP 173 HSP 3 Score: 83.1889 bits (204), Expect = 1.220e-15 Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 2 Query: 218 MLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKG-LPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 M G +PER G+P+CSY++RTG C++ CK++HP +R K KG P R GQ C YY + G CKFG CK+ HP Sbjct: 48 MEAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADR--KMAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHP 127
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.484e-29 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPPPS 508 FPERPGQPEC ++++TGDCK+ + CK+HHP++R P C LS GLPLRPG+ +C +YSRYGICKFGP+CK+DHP+ P PS Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPS 331 HSP 2 Score: 97.0561 bits (240), Expect = 8.163e-20 Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 GE+PER GQPEC ++L+TG CK+ CK+HHP+N+ +++ PLRP ++ CSY+ R G CKFG CK++HP Sbjct: 82 GEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHP 159 HSP 3 Score: 81.2629 bits (199), Expect = 4.635e-15 Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKG-LPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 G +PER G+P+C+Y++RTG C++ S C+++HP +R K T KG P R GQ C +Y + G CKFG CK+ HP Sbjct: 37 GSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDR--KLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHP 113
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.307e-29 Identity = 49/77 (63.64%), Postives = 64/77 (83.12%), Query Frame = 2 Query: 233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI 463 FPERP QPEC ++++TGDCK+ + CK+HHPK R+ +P C L+ GLPLRPG+ VC++YSRYGICKFGP CK+DHP+ Sbjct: 315 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPM 391 HSP 2 Score: 95.1301 bits (235), Expect = 3.102e-19 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 GE+P R GQPEC Y+L+TG CK+ + CK+HHP+ + + L+ G P+RP + C+YY R G CKF CK+ HP Sbjct: 106 GEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHHP 183 HSP 3 Score: 82.0333 bits (201), Expect = 2.718e-15 Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 +PER G+P+CSY++RTG C++ CK++HP NR ++ + P R GQ C YY + G CKFG CK+ HP Sbjct: 63 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNGE-YPYRVGQPECQYYLKTGTCKFGATCKFHHP 137
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.257e-28 Identity = 48/77 (62.34%), Postives = 64/77 (83.12%), Query Frame = 2 Query: 233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI 463 FPERPGQPEC ++++TGDCK+ + CK+HHP++R P C LS GLPLRPG+ +C +Y+RYGICKFGP+CK+DHP+ Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPM 347 HSP 2 Score: 95.9005 bits (237), Expect = 1.819e-19 Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 2 Query: 227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 GE+PER GQPEC Y+L+TG CK+ CK+HHP+N+ + +L+ G PLR + C+Y+ R G CKFG CK++HP Sbjct: 80 GEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHP 157 HSP 3 Score: 86.6557 bits (213), Expect = 1.103e-16 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 218 MLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKG-LPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 M G +PERPG+P+CSY++RTG C++ S C+++HP++R + T +G P R GQ C YY + G CKFG CK+ HP Sbjct: 32 METGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDR--ELVIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHP 111
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 2.799e-28 Identity = 60/130 (46.15%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 71 TPGVPSQNSEWNGYQSPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 T G Q G Q L P S P Y + +NV FPERP QPEC Y+++TGDCK+ + CK+HHP+ R +P C LS GLPLRPG+ +C +YSRYGICKFG CK+DHP Sbjct: 291 TYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQR----ENV------------FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHP 404 HSP 2 Score: 97.4413 bits (241), Expect = 6.250e-20 Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 2 Query: 227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 GE+PER GQPEC Y+L+TG CK+ CK+HHP+ + + L+ G PLRP + C+YY + G CK+G CK+ HP Sbjct: 120 GEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHP 197 HSP 3 Score: 85.5001 bits (210), Expect = 2.458e-16 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 41 APFVPMMYSPTPGVPSQNSEWNGYQSPLYPQERSVQSAPTY---VINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 AP P+ P P PSQ P + P++ + + + + M G +PER G+P+C+Y+LRTG C++ +C+++HP++R + + P R GQ C YY + G CKFGP CK+ HP Sbjct: 21 APTPPLPPPPPPPPPSQ-----------LPATAAATDEPSHDPAALYGEGMWQQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGE-YPERMGQPECQYYLKTGTCKFGPTCKFHHP 151
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H34_ARATH (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 6.236e-28 Identity = 63/156 (40.38%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 41 APFVPMMYSPTPGVPSQNSEWNGYQSPLYPQ-----ERSVQSAPTYVI-----NNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDAS 478 +P+ P M P VP S WN YQ+ L + S+ S+ Y + + Q + EFP+RP QPEC YF+RTGDCK+ S+C+YHHP + +P LS GLPLRPG C++++++GICKFGPACK+DH + S Sbjct: 232 SPYGPPMVLPPGMVPY--SGWNPYQASLSAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLS 385 HSP 2 Score: 95.1301 bits (235), Expect = 3.102e-19 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSP--PCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI 463 G PER G P C +F+RTG CK+ ++CKYHHP+ P +LS G PLRPG+ CSYY R G CKFG C+++HP+ Sbjct: 95 GALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPV 175 HSP 3 Score: 82.8037 bits (203), Expect = 1.593e-15 Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460 +PERP +P+C Y+LRTG C Y S C+++HP++R LP R G VC ++ R G CKFG +CKY HP Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHP 126 The following BLAST results are available for this feature:
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623496 ID=BQ623496; Name=BQ623496; organism=Citrus sinensis; type=EST; length=631bpback to top |