CB250257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 3.684e-94 Identity = 160/210 (76.19%), Postives = 185/210 (88.10%), Query Frame = 2 Query: 2 QGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQPAEASCANADGSASGFILPNSCL 631 QGV+VS +G+SPNTDGIHVQ SSGVTIL+SKI TGDDCVS+GPG +NLWIE VACGPGHGISIGSLGKEQ+EAGVQNVTV +VTF+GTQNG+RIKSWGR S+GFARNILFQHA M NV+NPI+IDQ+YCPDN+ CPGQ SGV+ISDV Y+DIHGTSATEV VK DCS ++PC I LEDVKL+Y NQ AE+SC++ADG+ G + P SCL Sbjct: 184 QGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKNQAAESSCSHADGTTEGVVQPTSCL 393
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 8.829e-72 Identity = 130/210 (61.90%), Postives = 165/210 (78.57%), Query Frame = 2 Query: 5 GVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQPAEASCANADGSASGFILPNSCLK 634 GVKVSA +SPNTDGIHV++S V I +S+IGTGDDC+S+GPG+TN++I+ + CGPGHGISIGSLG+ ++E GV NVTV++V F GT NGVRIK+WG+ S+ FARNI+FQH M V NPIIIDQ+YC ++ CP Q SGVK+S+V Y+DIHGTS TEV V LDCS PCTGI ++DV L ++PA+ASC NA+GSA+ + CLK Sbjct: 191 GVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCL-HKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPCLK 399
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 5.950e-52 Identity = 104/209 (49.76%), Postives = 135/209 (64.59%), Query Frame = 2 Query: 8 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQ--PAEASCANADGSASGFILPNSC 628 + + A +S NTDGIH+ S+GV ++ +KI TGDDCVS+G G NL +ENV CGPGHGISIGSLG+ E V+ VTV T NGVRIK+W + G A NILF+ M+NV P++IDQ YCP G S VK+SDV + I GTSAT+V VKL CS PCT I+L D+ L +N + PA ++C+N SG ++P +C Sbjct: 228 IGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 436
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 3.856e-51 Identity = 100/204 (49.02%), Postives = 134/204 (65.69%), Query Frame = 2 Query: 14 VSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQP--AEASCANADGSASGFILP 619 V++ DSPNTDGIHV + + I DS + TGDDC+S+ G+ N+ + CGPGHGISIGSLG++ EA V NV V T GT NGVRIK+W + G A+NI+FQ +M NV NPIII+Q+YC E CP Q S V++S+V+Y++I GTS+ + VK CS PC GIS+++VKL Q ++ASC+N G + P Sbjct: 234 VTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTW-QGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVKLDTRGNVSP 436
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.578e-51 Identity = 101/209 (48.33%), Postives = 138/209 (66.03%), Query Frame = 2 Query: 2 QGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQA-SGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQ--PAEASCANADGSASGFILP 619 Q V V+A G S NTDGIHV S GVTI ++KI TGDDC+S+GPG+ N+ I V CGPGHGISIGSLG+ E V+ +TV TF+GT NGVR+K+W + G A ++ FQ MNNV NP+I+DQ YCP + C QA S +K+S++ + +I GTS +V V + CS PC+ + + ++ LSY PA ++C+N + SG +P Sbjct: 165 QHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQ-CSRQAPSRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTFSGKQVP 372
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.265e-50 Identity = 99/204 (48.53%), Postives = 138/204 (67.65%), Query Frame = 2 Query: 8 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQPAEASCANADGSASGFILP 619 V+++A GDSPNTDGIH+ + + + +S IGTGDDC+S+ G NL I ++ CGPGHGISIGSLG + +A V + V F+ + NGVRIK++ + SG A+NI FQ+ M NV NPIIIDQ+YC D + C Q S V++ +V+Y++I GTSAT+V + L+CS + PC GI LE+VK+ + ASC NA+ G + P Sbjct: 231 VEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTY-QGGSGTAKNIKFQNIRMENVKNPIIIDQDYC-DKDKCEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKI----KGGTASCKNANVKNQGTVSP 428
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.569e-50 Identity = 97/208 (46.63%), Postives = 135/208 (64.90%), Query Frame = 2 Query: 11 KVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNNQ--PAEASCANADGSASGFILPNSC 628 K+SAA S NTDGIH+ S GV I++++I TGDDC+S+G G+ N+ I N+ CGPGHGIS+GSLG+ + E V + V + T TG+QNGVRIK+W ++ G A + FQ MN+V PI+IDQ YCP N+ S VK+S + +++I GTS T+ VKL CS PC G+ L D+ L+Y+ + PA + C N + G +P C Sbjct: 147 KISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAIC 354
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.569e-50 Identity = 100/204 (49.02%), Postives = 132/204 (64.71%), Query Frame = 2 Query: 14 VSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSY-NNQPAEASCANADGSASGFILPN 622 V+A +SPNTDGIHV + + I IGTGDDC+S+ G+ + + ++ CGPGHGISIGSLG EA V +V V GT NGVRIK+W + SG A NI FQ+ M+NV+NPIIIDQNYC ++ C Q+S V++ +V+YQ+I GT A+ V + DCS R PC GI LEDV L A+A C N + S +G + P+ Sbjct: 252 VTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTW-QGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGAAAKALCNNVELSETGVVSPH 454
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.610e-49 Identity = 97/204 (47.55%), Postives = 134/204 (65.69%), Query Frame = 2 Query: 14 VSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKL-SYNNQPAEASCANADGSASGFILPN 622 ++A+ SPNTDG+HV + + I D+ IGTGDDC+S+ G+ N+ N+ CGPGHGISIGSLG EA V NVTV G +NGVRIK+W + SG A NI F + M +V PIIIDQNYC E C Q S V++ +V+Y++I GTSAT+V +K DCS+ PC GI +E++ L + +P+EA+C N + + + P+ Sbjct: 239 INASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQATNITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTW-QGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSATKVAIKFDCSTNFPCEGIIMENINLVGESGKPSEATCKNVHFNNAEHVTPH 441
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.610e-49 Identity = 93/208 (44.71%), Postives = 129/208 (62.02%), Query Frame = 2 Query: 8 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLSYNN-QPAEASCANADGSASGFILPNSC 628 +K+ A +SPNTDGIH+ S GV I+ S I TGDDC+S+G G N+ I+ + CGPGHGISIGSLGK Q E V+ + +++ T T T NG RIK+W G I F+ MNNV +PI+IDQ YCP N+ + S VK+S++ +++I GTSA +K CS +PC + L D+ + +N +PA + C N SG + P C Sbjct: 188 LKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAEPATSQCLNVKPITSGKLNPIPC 395 The following BLAST results are available for this feature:
BLAST of CB250257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250257 ID=CB250257; Name=CB250257; organism=Citrus sinensis; type=EST; length=715bpback to top |