CB290196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: RRMJ3_DICDI (rRNA methyltransferase 3 homolog OS=Dictyostelium discoideum GN=fsjC PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.797e-27 Identity = 66/168 (39.29%), Postives = 97/168 (57.74%), Query Frame = -3 Query: 319 DEEVDTKAEILACAKKMLRKKQREQILDDVYNRYMFDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK--RPKKEYVVAKKGVQVRAGKGKV-LVDPRMKKDSR 813 DE++D K + A + ++RKK R+ ++DD +N+Y F+D GLP+WF ++E RH +A P+TKE + ++ + KEID K+EK R KA+ I D ++S+R K K IE+LY K +PKK ++AKK G GK +VD RMKKD R Sbjct: 638 DEDIDDKIKTKALGEFLIRKKSRQDLIDDSFNKYAFNDTGLPNWFTDDENRHNKAQTPLTKEMVDEIRRKIKEIDDRPIKKIAEAKARKKYRLGKKMEKTRDKASSIVDNPEMSNREKSKAIEKLYSGTDKKNMKPKKIIMIAKKSKTAGGGTGKYKIVDKRMKKDLR 805
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_ASPFU (AdoMet-dependent rRNA methyltransferase spb1 OS=Aspergillus fumigatus GN=spb1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.058e-21 Identity = 62/168 (36.90%), Postives = 98/168 (58.33%), Query Frame = -3 Query: 319 AEILACAKKMLR-KKQREQILDDVYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVV-----AKKGV--QVRAGKGKV-LVDPRMKKDSR 792 AE +A A++M +K+ + I+DD +NRY F D DGLP+WFL++E +H + RP+TK AA+K + + I+ +LEK+RKK+ +++D +S+R K + I +L AV K+PK++ + A +G+ + R KGK +VD RMKKD R Sbjct: 618 AEAMALAQQMATGEKKSQDIIDDGFNRYTFRDVDGLPEWFLDDENKHSKPQRPITKAAAAAIKEKLRAINARPIKKVMEAKGRKKMKAAQRLEKLRKKSALLADDEALSERDKSQAIAKLMSKAVKKKPKQQVKLVVARGANRGISGRPRGVKGKYKIVDSRMKKDIR 785
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_EMENI (AdoMet-dependent rRNA methyltransferase spb1 OS=Emericella nidulans GN=spb1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 60/168 (35.71%), Postives = 98/168 (58.33%), Query Frame = -3 Query: 319 AEILACAKKMLR-KKQREQILDDVYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAKKGVQVRAG-----KGKV-LVDPRMKKDSR 792 AE +A A++M +K+ + + DD +NRY F D DGLP+WFL++E +H + RP+TK AA++ +++ I+ ++EK+RKK+ +++D +S+R K + I ++ A K+PK+ + VVAK G + +G KGK +VD RMKKD R Sbjct: 628 AEAMALAQQMATGEKKSQDVFDDGFNRYAFRDVDGLPEWFLDDENKHSKPNRPITKAAAAAIQEKWRAINARPIKKVMEAKGRKKFKAAQRIEKLRKKSALLADDETMSERDKAQAIARMMSRAAKKKPKQNVKLVVAKGGNRGISGRPKGVKGKYKIVDARMKKDVR 795
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: RRMJ3_HUMAN (Putative rRNA methyltransferase 3 OS=Homo sapiens GN=FTSJ3 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.467e-18 Identity = 58/156 (37.18%), Postives = 87/156 (55.77%), Query Frame = -3 Query: 319 KKQREQILDDVYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV--QVRAGKGK----VLVDPRMKKDSR 756 KK + ++D+ +NRY F++D LP+WF++EE++HR PV K+E+ + +++EI+ +LE+ RKKA + + DIS+R K Q+ LYK A + K+ YVVAKKGV +VR G +VD RMKKD R Sbjct: 678 KKAKRDLIDNSFNRYTFNEDEGELPEWFVQEEKQHRIRQLPVGKKEVEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRHVTYVVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 833
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: RRMJ3_PONAB (Putative rRNA methyltransferase 3 OS=Pongo abelii GN=FTSJ3 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.495e-18 Identity = 57/156 (36.54%), Postives = 87/156 (55.77%), Query Frame = -3 Query: 319 KKQREQILDDVYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV--QVRAGKGK----VLVDPRMKKDSR 756 KK + ++D+ +NRY F++D LP+WF++EE++HR P+ K+E+ + +++EI+ +LE+ RKKA + + DIS+R K Q+ LYK A + K+ YVVAKKGV +VR G +VD RMKKD R Sbjct: 672 KKAKRDLIDNSFNRYTFNEDEGELPEWFVQEEKQHRIRQLPIGKKEMEHYRKRWREINARPIKKVAEAKARKKRRMLKRLEQTRKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRHVTYVVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 827
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: RRMJ3_RAT (Putative rRNA methyltransferase 3 OS=Rattus norvegicus GN=Ftsj3 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.224e-17 Identity = 56/156 (35.90%), Postives = 88/156 (56.41%), Query Frame = -3 Query: 319 KKQREQILDDVYNRYMF--DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV--QVRAGKGK----VLVDPRMKKDSR 756 KK + ++D+ +NRY F +++ LP+WF++EE++HR P+ K+E+ + +++EI+ KLE+ +KKA + + DIS+R K Q+ LYK A + K++ YVVAKKGV +VR G +VD RMKKD R Sbjct: 661 KKAKRDLIDNSFNRYAFNEEEEELPEWFVQEEKQHRIRQLPLDKKEVEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTYVVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQR 816
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: RRMJ3_MOUSE (Putative rRNA methyltransferase 3 OS=Mus musculus GN=Ftsj3 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.224e-17 Identity = 57/156 (36.54%), Postives = 87/156 (55.77%), Query Frame = -3 Query: 319 KKQREQILDDVYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGV--QVRAGKGK----VLVDPRMKKDSR 756 KK + ++D+ +NRY F+++ LP+WF +EE++HR PV K+E+ + +++EI+ KLE+ +KKA + + DIS+R K Q+ LYK A + K++ YVVAKKGV +VR G +VD RMKKD R Sbjct: 669 KKAKRDLIDNSFNRYAFNEEEGELPEWFAQEEKQHRIRQLPVDKKEVEHYRKRWREINARPIKKVAEAKARKKRRVLKKLEQTKKKAEAVVNTVDISEREKVAQLRSLYKKAGLGKEKRQVTYVVAKKGVGRKVRRPAGVKGHFKVVDSRMKKDQR 824
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_CANGA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Candida glabrata GN=SPB1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.088e-17 Identity = 58/180 (32.22%), Postives = 99/180 (55.00%), Query Frame = -3 Query: 319 ESEDEEVD-TKAEILACAKKM-LRKKQREQILDDVYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVA---KKGVQVRAG--KGKV-LVDPRMKKDSR 822 E D+++D E + A ++ L ++ + ++D+ +NRY F D + LP+WFLEEE++H + RP+TKE + A+K + K ++ +LEK++KKA +I+D +D S++ K ++I +L + K +PK VVA KG+ R KGK +VD +K + R Sbjct: 644 EKYDKDIDIATVEAMTLAHQLALGQRSKHDLVDEGFNRYAFRDTENLPEWFLEEEKQHSKVNRPITKEAVMALKEKMKALNARPIKKVAEARARKKMRAVKRLEKIKKKAGLINDDSDKSEKDKAEEIAKLMRKVTKKQKTKPKVTLVVAHGKNKGLSGRPKGIKGKYKMVDGVLKNEQR 823
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_SCHPO (AdoMet-dependent rRNA methyltransferase spb1 OS=Schizosaccharomyces pombe GN=spb1 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.075e-17 Identity = 60/181 (33.15%), Postives = 100/181 (55.25%), Query Frame = -3 Query: 319 ESEDEEVDTK---AEILACAKKML-RKKQREQILDDVYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAK---KGVQVR--AGKGKV-LVDPRMKKDSR 822 +S+++E + + AE + A+ + R+K + ++D+ YNR+ F +GLPDWFL+EE + +P+TKE + A++ + K ++ +L++V KKA IS+ D+++ K K+I +L A +PK + VVAK KG++ R KGK +VD RMKKD R Sbjct: 611 DSDNDENNVEIVTAEAMTLAQDIASRRKSKADLIDEGYNRWSFQSKEGLPDWFLDEETTVNKPNKPITKEAVLALREKMKALNARPIKKVLEAQGRKKMRTIKRLQRVAKKAEGISESGDMTESEKAKEISRLVSRATKSKPKAKPTLVVAKGPNKGLKSRPKGVKGKYKMVDSRMKKDLR 791
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: RRMJ3_CHICK (Putative rRNA methyltransferase 3 OS=Gallus gallus GN=FTSJ3 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17 Identity = 53/157 (33.76%), Postives = 88/157 (56.05%), Query Frame = -3 Query: 319 KKQREQILDDVYNRYMFDDDG--LPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKE--YVVAKKGVQVRA-------GKGKVLVDPRMKKDSR 756 KK + ++DD +NRY F+++ LP+WF EEE++HR+ P+ K+ + + ++++I+ K+E+++KKA + DIS+R K Q+ ++YK A + K++ Y+VAKKGV R G+ KV VD R+KKD R Sbjct: 665 KKAKRDLIDDSFNRYSFNEEEGELPEWFTEEEKQHRRKQIPLDKQTVEEYRQRWRQINARPIKKVAEAKARKKRRMLKKMEQMKKKAEAVVSTVDISEREKVAQLRRIYKKAGLGKEKRQVTYLVAKKGVGPRVRRPPGVKGQFKV-VDSRLKKDVR 820 The following BLAST results are available for this feature:
BLAST of CB290196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290196 ID=CB290196; Name=CB290196; organism=Citrus sinensis; type=EST; length=824bpback to top |