CB290506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 3.011e-64 Identity = 125/187 (66.84%), Postives = 145/187 (77.54%), Query Frame = -3 Query: 292 AQAGGENKDTSVDVHVNSG----NQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAG------GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 822 A+A G+NKDTSVDVH +S NQGT VERRP R ALD+SPFG++DP P RTMRQM+DTMDRL EDTM FPGR+RA G G++RTPWDI ++ENEIKMRFDMPGL +LVIKGEH+ EE G G ++SSYDTRL LPDN KDK+KAELKNGVL+ISIPKT+VE+KVIDVQI Sbjct: 48 ARATGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFEDTMTFPGRNRASGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTEVEKKVIDVQI 234
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.549e-63 Identity = 127/187 (67.91%), Postives = 145/187 (77.54%), Query Frame = -3 Query: 292 AQAGGENKDTSVDVHVNSGNQG-----TQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAG-----GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 822 AQA G+NKDTSVDVHV++ NQG + VERRPRR ALD+SPFGL+DP P RTMRQM+DTMDRL EDTM FPG SR G G++R PWDIK++ENEIKMRFDMPGL VLVIKGEH+ EE+G G ++SSYDTRL LPDN +KDKVKAELKNGVL ISIPKTKVE+KV DV+I Sbjct: 55 AQATGDNKDTSVDVHVSNNNQGGNNQGSAVERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDTMTFPG-SRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEKKVTDVEI 240
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.681e-62 Identity = 119/182 (65.38%), Postives = 146/182 (80.22%), Query Frame = -3 Query: 292 GGENKDTSVDV-HVNSGNQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGA-------SFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 813 GG+NKD SV+V HV+ G+QGT VE++PRRTA+DISPFG++DP P R+MRQ+LDTMDR+ EDTM FPGR+ GGG++R PWDIK+EE+EI+MRFDMPGL +LVIKG H++E+ G ++SSYDTRL+LPDNCEKDKVKAELKNGVLYI+IPKTKVERKVIDVQ+ Sbjct: 1 GGDNKDNSVEVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDTMTFPGRNI--GGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVQV 180
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.108e-58 Identity = 118/187 (63.10%), Postives = 144/187 (77.01%), Query Frame = -3 Query: 292 VRAQAGGE--NKDTSVDVH-VNSGNQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAG-----GASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 828 VRAQAGG+ NKD SV+VH VN +QGT VER+PRR+++DISPFGL+DP P R+MRQMLDTMDR+ ED + PGR+ GGG++R PW+IK+EE+EI+MRFDMPG+ VLVIK +HR E G S+S YDTRL+LPDNCEK+KVKAELK+GVLYI+IPKTK+ER VIDVQI Sbjct: 47 VRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAITIPGRNI--GGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIERTVIDVQI 231
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 6.723e-56 Identity = 116/185 (62.70%), Postives = 134/185 (72.43%), Query Frame = -3 Query: 292 VRAQAGGENKDTSVDVHVNSGNQGTQVERRPR-RTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGG-GQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEA----GGASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 828 +RAQ EN V GNQG+ VE+RP+ R +D+SPFGL+DP P RTMRQMLDTMDR+ EDTM GR+R G G ++R PWDIKEEE+EIKMRFDMPGL VLVIKGE + E++ G S SSY TRLQLPDNCEKDK+KAELKNGVL+I+IPKTKVERKVIDVQI Sbjct: 42 IRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVERKVIDVQI 226
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.736e-49 Identity = 105/193 (54.40%), Postives = 123/193 (63.73%), Query Frame = -3 Query: 292 AQAGGENKDTSVDVHV----NSGNQ-GTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGG-----------ASFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 822 A A EN+D SVDV V N+GNQ G V+RRPRR DISPFGL+DP P RTMRQMLDTMDRL +D + FP R + R PWDI E+E E+KMRFDMPGL LVI+GEH+ E G S SSYD RL LPD C+K +V+AELKNGVL +S+PK + ERKVIDVQ+ Sbjct: 45 ASAAQENRDNSVDVQVSQAQNAGNQQGNAVQRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDDAVGFPTRRSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGGDGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPKRETERKVIDVQV 237
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.951e-48 Identity = 110/196 (56.12%), Postives = 133/196 (67.86%), Query Frame = -3 Query: 292 AQAGGENKD-TSVDVHVNS--GNQ-GTQVERRPRRT-ALD-ISPFGLMDPSFPTRTMRQMLDTMDRLLEDT-MAFPGRSRAG-GGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGA-----------SFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERKVIDVQI 822 A A EN+D T+VDVHVN GNQ G V+RRPRR+ ALD ISPFGL+DP P RTMRQMLDTMDR+ +D + FP R G+VR PWD+ E++ E++MRFDMPGL LVI+GEH+ EE GA S SSYD RL LPD C+K KV+AELKNGVL +++PKT+VERKVIDVQ+ Sbjct: 44 ASAAQENRDNTAVDVHVNQDGGNQQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDDVALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTEVERKVIDVQV 239
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.267e-18 Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = -3 Query: 310 GTQVERR--PRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGASFSS----YDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERK 759 G + RR PRR S + DP PTR++ Q+L+ MD+ +E+ + +R G R WDIKE+++ + +R DMPGL LVI+GE + EE GG S + +R+ LPD K D++KAE+KNGVL + IPK K + + Sbjct: 49 GVDLYRRSVPRRRGDFFSD--VFDPFSPTRSVSQVLNLMDQFMENPLL--SATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQER 201
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.370e-16 Identity = 49/134 (36.57%), Postives = 77/134 (57.46%), Query Frame = -3 Query: 310 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGASFSS--YDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERK 702 ++DP PTR++ QML+ MD++ E + +R G VR W++KE+++ + +R DMPGL LVI+GE EE S + +R++LP+ K D++KAE+KNGVL + IPK K + + Sbjct: 70 ILDPFTPTRSLSQMLNFMDQVSEIPLV--SATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDER 201
BLAST of CB290506 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.883e-16 Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = -3 Query: 289 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXVLVIKGEHRAEEAGGASFSSYDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERKVIDVQIL 702 + DP TR++ Q+++ MD+L+E+ R G G +R WD++E+E ++++ DMPGL L+IK E E Y +R++L N K D +KAE+KNGVL +++PK K E K Q++ Sbjct: 67 VFDPFRATRSVGQLMNLMDQLMENPFMAASR---GSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVM 202 The following BLAST results are available for this feature:
BLAST of CB290506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290506 ID=CB290506; Name=CB290506; organism=Citrus sinensis; type=EST; length=830bpback to top |