CB290515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290515 vs. ExPASy Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 4.997e-72 Identity = 140/254 (55.12%), Postives = 180/254 (70.87%), Query Frame = 3 Query: 66 MACSSAALRTISSASVKLANSTSLTKSSSIL-VPFKLNNPSLITQCPHLQAATSCNFTVPKRSFTCRSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVN-SLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPSPAAKACEPGAAIDNFTN 818 M +S+A +IS +++ + + S+ L +N + + P L + F ++S+D RPTK+QEL+VYE NE DR SPA L+L +KP LGDLVPF+NKLYTGDL KR+GITAG+C+LI++ PEKKGDR+EA+YSFYFGDYGHI+VQGPYLTYEDT+LA+TGGSG+FEG YGQVKL+QLV+P KLFYTFYLKG+ DLP L GK V+P V+P+ A+A +PGA I NFTN Sbjct: 1 MIMASSAAASISMITLRNLSRNHQSHQSTFLGFSRSFHNQRISSNSPGLSTRARSTTSSTGGFFRTICSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGVFEGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQPGATIANFTN 254
BLAST of CB290515 vs. ExPASy Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.454e-71 Identity = 143/255 (56.08%), Postives = 180/255 (70.59%), Query Frame = 3 Query: 66 MACSSAALRTISSASVKLANSTSLTKSSSILVPFK-LNNPSLITQCPHLQAATSCNFTVPKRSFTCR--SQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPSPAAKACEPGAAIDNFTN 818 MA S+ +L++IS ++ + SS+L K N + + +S FT K R SQ + ++PRP+KVQEL VYEINE DR SP L+ + + LGDLVPF+NKLYTGDL+KRVGITAG+C++IE+ PEKKG+R+EATYSFYFGDYGH++VQGPYLTYED++LA+TGG+GIFEG YGQVKLQQLV+P KLFYTFYLKG+ DLP L G PV P +EP+P AKA EP I N+TN Sbjct: 1 MASSAVSLQSISMTTLNNLSCNQQFHRSSLLGSSKSFQNLGISSNGSDFSYPSS--FTAKKNLTASRALSQNGNIENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKDIEPAPEAKALEPSGVISNYTN 253
BLAST of CB290515 vs. ExPASy Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.899e-71 Identity = 142/256 (55.47%), Postives = 184/256 (71.88%), Query Frame = 3 Query: 66 MACSSAALRTISSASVK-LANSTSLTKSSSILVPFKLNNPSLITQCPHLQAATSCNFTVPKRSFTCRSQANS---SDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPSPAAKACEPGAAIDNFTN 818 MA S+ +L++IS ++ L+ S +SS + N + + P + TS FT K+ R+ + + +++PRP+KVQEL VYEIN+ DR SP L+ + LGDLVPF+NKLYTGDL+KRVGITAG+C++IE+ PEK GDR+EATYSFYFGDYGH++VQGPYLTYED++LA+TGG+GIFEG YGQVKLQQLV+P KLFYTFYLKG+ DLP L+G PV P VEP+P AKA +P + NFTN Sbjct: 1 MASSTISLQSISMTTLNNLSYSKQFHRSSLLGFSKSFQNFGISSNGPGSSSPTS--FTPKKKLTPTRALSQNLGNTENPRPSKVQELSVYEINDLDRHSPKILKNAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPSKDVEPAPEAKALKPSGVVSNFTN 254
BLAST of CB290515 vs. ExPASy Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 4.230e-71 Identity = 147/261 (56.32%), Postives = 184/261 (70.50%), Query Frame = 3 Query: 66 MACSSAALRTISSASVKLANSTSLTKSS--SILVPFK--LNNPSLITQCPHL----QAATSCNFTVPKRSFTCRSQANSSDDPRPTKVQELHVYEINERDRGSPAYLRLSQKPVN-SLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFGDYGHIAVQGPYLTYEDTYLAVTGGSGIFEGVYGQVKLQQLVFPFKLFYTFYLKGI-KDLPEVLLGKPVDPHPGVEPSPAAKACEPGAAIDNFTN 818 MA SSAA+ ++ S S+ N+ S S S L+ F N + + P ++ TS N V + F + +++ RP+K+QEL+VYE+NE DR SPA L+L +KP LGDLVPF+NKLYTGDL+KRVGITAG+C+LI++ PEK GDR+EA+YSFYFGDYGH++VQG YLTYEDT+LAVTGGSGIFEG YGQVKL+QLV+P KLFYTFYLKG+ DLP L G V P V+P+P AKA EP I NFTN Sbjct: 1 MASSSAAM-SLESISMTTLNNLSRNHQSHRSSLLGFSRSFQNLGISSNGPDFSSRSRSTTSKNLNVTRAFFW--NWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKDVKPAPEAKAMEPSGVISNFTN 258 The following BLAST results are available for this feature:
BLAST of CB290515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290515 ID=CB290515; Name=CB290515; organism=Citrus sinensis; type=EST; length=819bpback to top |