CB290521
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290521 vs. ExPASy Swiss-Prot
Match: CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.092e-38 Identity = 86/184 (46.74%), Postives = 115/184 (62.50%), Query Frame = -1 Query: 270 KELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDDPS---QGTIRSSPKMISLWKRAIESTKALVLDEINLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSMAEYEDGSQSXXXXXXXXXXXXXXXXXXXXXXXXXXDVVPLGSLPVDHIAERLQRK 812 KELVPCVLLSFDDEQILMWRG++WKS + + P + + + + D S PS++ + T SSPKMISLW+RA+ES+KA++L+E++LGPDDLLKKVEE EG S AAEH+Y A+VLS DGA+ + +D S+ V P+GSLPVD I +L+ + Sbjct: 385 KELVPCVLLSFDDEQILMWRGREWKSRFVDNPLIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEE------YYSDIDDDFDDECSDDESLDPVGPVGSLPVDKIVRKLRER 562
BLAST of CB290521 vs. ExPASy Swiss-Prot
Match: CAF2P_MAIZE (CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.344e-26 Identity = 79/193 (40.93%), Postives = 105/193 (54.40%), Query Frame = -1 Query: 279 KELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKRAIESTKALVLDEI---NLGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEYEDG------SQSXXXXXXXXXXXXXXXXXXXXXXXXXXDVVPLGSLPVDHIAERL 812 ++LVPCVLLSFDDEQILM RGK+WKS Y +P + V +L + + S SD +Q IR PKM LWK A++S+ AL+LD+ NL PD LL VEEF SQA EHS+PAL+++ D ++ S+ AEY + + + VPLGSLP+D + ERL Sbjct: 416 RDLVPCVLLSFDDEQILMHRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIREVLRPKMFKLWKSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGDASTDSLSAEYMNDEPETSVAGNEEGQLEQSPDLRDDEHFDVDMFERLESSVPLGSLPIDSMIERL 608
BLAST of CB290521 vs. ExPASy Swiss-Prot
Match: CAF2P_ORYSJ (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.002e-24 Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = -1 Query: 279 KELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPKMISLWKRAIESTKALVLDEIN---LGPDDLLKKVEEFEGISQAAEHSYPALVLSREDGASSSM-AEYEDGSQSXXXXXXXXXXXXXXXXXXXXXXXXXXDV------VPLGSLPVDHIAERL 812 ++LVPCVLLSFD+EQILM+RGK+WKS YP+P + + ++ ++ D S +DD + +R PKM LW AIES+ AL+LD+ L PD LL +VE+F SQ EHS+PA++++ ++ + AEY + + VPLG+LP+D + ++L Sbjct: 412 RDLVPCVLLSFDNEQILMFRGKEWKSRYPKPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELWTNAIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLVANDESNPDVLNAEYTEDEPETGTLEPQQHEFTESSDVAEDDHFEDDMLKRLESSVPLGALPIDAVVKQL 604 The following BLAST results are available for this feature:
BLAST of CB290521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290521 ID=CB290521; Name=CB290521; organism=Citrus sinensis; type=EST; length=812bpback to top |