CB290522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 6.706e-92 Identity = 153/206 (74.27%), Postives = 174/206 (84.47%), Query Frame = 1 Query: 154 QKPKSRPNPAFKLPHRHTRYYKPVNRGVIASDGDRGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQEGKTREDILGEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNVCR 771 +KP+S NPA KLPH TRYYKPV GVI+SDGDR + IG+SGVSY+LPGAPFEFQ+SY+ETP+ KP+ IREPAF+PF PPTMPRPWTGK PL IPLFDSFNPP GK GVK+VEMPGP P G+YP+EG RE++LGEPLKRWE ML+KP + DNRQVNLGRDG THNMLELIHSHWKRRRV K++CKGVPTVDM+NVCR Sbjct: 61 KKPQS--NPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSETPKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCR 264
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 6.122e-61 Identity = 118/211 (55.92%), Postives = 145/211 (68.72%), Query Frame = 1 Query: 148 KEQKPKSRPNPAFKLPHRHTRYYKPVNRGVIASDGDR---GVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQ-EGKTREDILGEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNVC 768 K + + +PAF R P+ +D D GV + + G+SYRL GAPFEFQYSYTE P+A+P+A+RE F+PFGP PRPWTG++PL +P FDSF P PGKKGVK V+ PGPF G P+ + +REDILGEPL + E+S LVK LK RQ+N+GRDGLTHNMLE IHSHWKR+RV KIKCKGV T+DMDN+C Sbjct: 41 KRHRRAATSHPAFSAAARGRAKKIPI------ADTDEPAAGVRVTDRGISYRLDGAPFEFQYSYTEAPRARPVALREAPFMPFGPEATPRPWTGRKPLPKSRKELPEFDSFVLPAPGKKGVKPVQSPGPFLAGMEPRYQSVSREDILGEPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDNIC 245
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF1P_ORYSJ (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0495900 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 3.038e-60 Identity = 110/172 (63.95%), Postives = 132/172 (76.74%), Query Frame = 1 Query: 259 GVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQ-EGKTREDILGEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNVCR 771 GV + E G++Y L GAPFEFQYSYTETP+A+P+A+RE FLPFGP PRPWTG++PL +P FDSF P PGKKGVK V+ PGPF G P+ + +RE++LGEPL + E+ LVK LK RQ+N+GRDGLTHNMLE IHSHWKR+RV KIKCKGV TVDMDNVC+ Sbjct: 75 GVRVTERGLAYHLDGAPFEFQYSYTETPRARPVALREAPFLPFGPEVTPRPWTGRKPLPKSRKELPEFDSFMLPPPGKKGVKPVQSPGPFLAGTEPRYQAASREEVLGEPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQ 246
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF2P_MAIZE (CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.615e-53 Identity = 106/221 (47.96%), Postives = 136/221 (61.54%), Query Frame = 1 Query: 175 NPAFKLPHRHTRYYKPVNRGVIASDGD-------------RGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPL---------XXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKY-PQEGKTREDILGEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNVC 768 NPAF+ H T Y KPV A +G+ R V +G SG+S+RLPGAPF+FQ+SY+E P+A PLAIREPAFLPF PPTMPRPWTGK PL PL + + V L + P +G++RE++LGEPL E+ LVKP + NRQ+N+GRDGLTHNMLE+IH HW+R+ + K++C+GVPTVDM N+C Sbjct: 74 NPAFRAAHLRTAYRKPVPPAAAAGEGEALLAADPTDAASGRAVVVGPSGLSFRLPGAPFDFQFSYSEAPRAPPLAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGQETPQTVSAHGIMMEVRERRKMDLARVSPGDGRSREEVLGEPLTPSEVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLC 294
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF1P_ARATH (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.615e-53 Identity = 112/218 (51.38%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 163 KSRPNPAF----KLPHRHTRYYKP------------VNRGVIASDGDRGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQEGKTREDILGEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNVC 768 +SR P+ +P R ++Y KP V D V + E G++Y + GAPFEF+YSYTETP+ KPL +REPA+ PFGP TM RPWTG+ PL FDSF P GKKG+K V+ PGPF G P+ ++E+ILGEPL + E+ LV LK RQ+N+GRDGLTHNML IH WKRRRV KIKCKGV TVDMDNVC Sbjct: 86 RSRGTPSLPSARSIPGRRSKYSKPDSGPNRPKNKPRVPDSPPQLDAKPEVKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVC 303
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF2P_ORYSJ (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.698e-53 Identity = 105/221 (47.51%), Postives = 138/221 (62.44%), Query Frame = 1 Query: 175 NPAFKLPHRHTRYYKPVNRGVIASDGD-------------RGVTIGESGVSYRLPGAPFEFQYSYTETPQAKPLAIREPAFLPFGPPTMPRPWTGKQPL---------XXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKY-PQEGKTREDILGEPLKRWEISMLVKPLLKDNRQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNVC 768 NPAF+ PH T Y KPV A +G+ R V +G SG+S+RLPGAPF+F++SY+E P+A P+AIREPAFLPF PPTMPRPWTGK PL PL + + + V L + P +G++RE++LGEPL E+ LVKP + NRQ+N+GRDGLTHNMLE+IH HW+R+ + K++C+GVPTVDM N+C Sbjct: 70 NPAFRAPHLRTAYRKPVPPVAAAGEGEALLAADASDAADGRAVVVGPSGLSFRLPGAPFDFRFSYSECPRAPPVAIREPAFLPFAPPTMPRPWTGKAPLLTKEEKARRRGVRLHTPLGEEAPRTVSAHGIMMEVRGRRKLDLARVSPGDGRSREEVLGEPLTAAEVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLC 290
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.165e-27 Identity = 69/158 (43.67%), Postives = 90/158 (56.96%), Query Frame = 1 Query: 307 PFEFQYSYTET-PQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQ-EGKTREDILGEPLKRWEISMLVKPLLKDN--RQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNVC 768 PF+F++SYTE+ P KP+ +REP + PFGP + RPWTG L L D+ H + P P + + + RE +LGEPL E + LV K +Q+NLGRDGLTHNML IH+HWK +++KC GVPTVDM NVC Sbjct: 77 PFDFRFSYTESSPGDKPIGLREPKYSPFGPGRLDRPWTG---LCAPAVDTTLRDA------------HADDPAPAAERELEEARRRERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVC 219
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.985e-24 Identity = 62/158 (39.24%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 307 PFEFQYSYTET-PQAKPLAIREPA-FLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQEGKTREDILGEPLKRWEISMLVKPLLKDN--RQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNVC 768 PF+F+YSY+ET P +P+ REP F PFGP + RPW G E G +RE++LGEPL E++ LV+ + RQ+NLG+ G+THNM++ IH+HWKR ++IKC GVPT+DMDN+C Sbjct: 80 PFDFRYSYSETDPAWRPIGFREPTRFSPFGPGRLDRPWDGVAA----------------------AAARGEGAGA--------AATSREEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNIC 207
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.067e-23 Identity = 69/200 (34.50%), Postives = 98/200 (49.00%), Query Frame = 1 Query: 175 NPAFKLPHRHTRYYKPVNRGVIASDGDRGVTIGESGVSYRLPGAPFEFQYSYTET-PQAKPLAIREPAFLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQEGKTREDILGEPLKRWEISMLVKPLL--KDNRQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNV 765 NP F + + + KP R + +G + V PF+F++SYTE+ +P+ +REP + PFGP + R WTG + NP + GV+ ++ + K RE I G L E LV+ K RQVNLGRDGLTHNML +++HWK +++KC GVPT+DM NV Sbjct: 50 NPDFNQKNNNKKKPKPQYRPPSSLEGVKTVH----------SDLPFDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTGV-----------CAPAVNPKVESVDGVEDPKLE--------EKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNV 220
BLAST of CB290522 vs. ExPASy Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22 Identity = 59/158 (37.34%), Postives = 87/158 (55.06%), Query Frame = 1 Query: 307 PFEFQYSYTET-PQAKPLAIREPA-FLPFGPPTMPRPWTGKQPLXXXXXXIPLFDSFNPPLPGKKGVKHVEMPGPFPLGKYPQEGKTREDILGEPLKRWEISMLVKPLLKDN--RQVNLGRDGLTHNMLELIHSHWKRRRVIKIKCKGVPTVDMDNVC 768 PF+F+YSY+ET P+ +P+ REP F PFGP + R WTG L +P + + V+ R +LGE L E++ L++ + RQ+NLG+ G+THNM++ IH+HWK+ ++IKC GVPT+DMDN+C Sbjct: 78 PFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALA------------SPEIDQSQWVEE------------------RARVLGETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNIC 205 The following BLAST results are available for this feature:
BLAST of CB290522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290522 ID=CB290522; Name=CB290522; organism=Citrus sinensis; type=EST; length=771bpback to top |