CB304552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 1.542e-61 Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPPLQHFD+AEPAFLQIAQYRAGIVP+SFRR+PC KKGGIRFT+NGHSYFNLVL++NVGGAGDVH+VSIKGSKT WQAMSRNWGQNWQSN Y N QSL FQVT SDGRT+ SN+V P+NW Sbjct: 117 NGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNW 242
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.105e-59 Identity = 104/125 (83.20%), Postives = 111/125 (88.80%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 +GGWCNPP HFDMAEPAFL IAQYRAGIVP+SFRR+PC KKGG+RFTVNGHSYFNLVLVTNV GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN + +GQSL FQVTASDGRTVTSNNV W Sbjct: 111 DGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGW 235
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.105e-59 Identity = 104/125 (83.20%), Postives = 111/125 (88.80%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 +GGWCNPP HFDMAEPAFL IAQYRAGIVP+SFRR+PC KKGG+RFTVNGHSYFNLVLVTNV GAGDV SVSIKGS+TGWQ MSRNWGQNWQSN + +GQSL FQVTASDGRTVTSNNV W Sbjct: 111 DGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGW 235
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 2.462e-59 Identity = 103/125 (82.40%), Postives = 109/125 (87.20%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 +GGWCNPP HFDMAEPAFLQI YRAGIVP+S+RR+PC KKGGIRFT+NGHSYFNLVLVTNV G GDV SVSIKGS TGWQ MSRNWGQNWQSN Y +GQSL FQV SDGRTVTSNNVVPA W Sbjct: 116 DGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGW 240
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 6.064e-58 Identity = 96/125 (76.80%), Postives = 111/125 (88.80%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPPL+HFD+A+P F +IAQYRAGIVP+S+RR+PC ++GGIRFT+NGHSYFNLVL+TNVGGAGDVHS +IKGS+T WQAMSRNWGQNWQSN Y NGQ+L F+VT SDGRTV S N PA W Sbjct: 113 NGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGW 237
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 3.009e-57 Identity = 93/124 (75.00%), Postives = 110/124 (88.71%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCNPP QHFD+++P F +IAQYRAGIVP+++RR+PC ++GGIRFT+NGHSYFNLVL+TNVGGAGDVHS +KGS+TGWQAMSRNWGQNWQSN Y NGQSL F+VT SDG+T+ SNNV A W Sbjct: 115 GGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGW 238
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 219.935 bits (559), Expect = 3.930e-57 Identity = 93/124 (75.00%), Postives = 112/124 (90.32%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCNPPL HFD+++P F +IAQY+AG+VP+S+RR+PC ++GGIRFT+NGHSYFNLVLVTNVGGAGDVHSV++KGS+T WQ MSRNWGQNWQSN NGQ+L F+VTASDGRTV SNN+ PA+W Sbjct: 118 GGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASW 241
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 1.651e-55 Identity = 97/126 (76.98%), Postives = 112/126 (88.89%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPPL+HFD+AEPAFLQIAQYRAGIVP++FRR+PC K GGIRFT+NG+ YF+LVL+TNVGGAGD+ +VS+KGSKT WQ+MSRNWGQNWQSN Y GQSL FQVT SDGRTV S +VVP +W Sbjct: 119 NGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDW 244
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 7.670e-53 Identity = 89/124 (71.77%), Postives = 105/124 (84.68%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCNPP HFD+A+P FL+IAQY+AG+VP+ +RR+ C +KGGIRFT+NGHSYFNLVL+TNV GAGDV SVSIKG+ T WQ+MSRNWGQNWQSN +GQ+L F+VT SDGRTV SNN P NW Sbjct: 117 GGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNW 240
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 2.232e-52 Identity = 88/125 (70.40%), Postives = 106/125 (84.80%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPP +HFD+A P FL+IAQYRAGIVP+S+RR+PC K+GGIRFT+NGH YFNLVL+TNV GAGD+ S+KGS+TGW ++SRNWGQNWQSN GQ+L F+VT SD RT TS N+VP+NW Sbjct: 120 NGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNW 244 The following BLAST results are available for this feature:
BLAST of CB304552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304552 ID=CB304552; Name=CB304552; organism=Citrus sinensis; type=EST; length=455bpback to top |