CB304600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_ORYSJ (60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 1.645e-41 Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = -2 Query: 222 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 491 TEFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALE IKLKFIDTSSKFGHGRFQTT EK +++G+LKA Sbjct: 300 TEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL32_ARATH (60S ribosomal protein L3-2 OS=Arabidopsis thaliana GN=ARP2 PE=2 SV=4) HSP 1 Score: 160.229 bits (404), Expect = 4.480e-39 Identity = 74/87 (85.06%), Postives = 82/87 (94.25%), Query Frame = -2 Query: 231 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 491 TE+DRTEKDITPMGGFPHYG+V EDYL+IKGCCVGPKKRVVTLRQ+LLKQTSRLA+E IKLKFID +S GHGRFQT+QEKAK+YGR Sbjct: 300 TEYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKLKFIDAASNGGHGRFQTSQEKAKFYGR 386
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL31_ARATH (60S ribosomal protein L3-1 OS=Arabidopsis thaliana GN=ARP1 PE=2 SV=5) HSP 1 Score: 154.836 bits (390), Expect = 1.882e-37 Identity = 71/88 (80.68%), Postives = 81/88 (92.05%), Query Frame = -2 Query: 228 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 491 TE+DRTEKD+TPMGGFPHYG+V +DYL+IKGCCVGPKKRVVTLRQSLL QTSRLALE IKLKFIDT+S FGHGRFQT+ EK ++Y R+ Sbjct: 300 TEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFYNRV 387
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 1.182e-31 Identity = 62/89 (69.66%), Postives = 73/89 (82.02%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R ALE IKLKFIDTSSK GHGRFQT +K + G LK Sbjct: 305 TEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 8.469e-30 Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T++D TEK + PMGGFPHYG+VN+D+++I+GCCVG KKR +TLR+SL+ QT R A E I LK+IDTSSKFGHGRFQT EK + G+LK Sbjct: 302 TDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKFGHGRFQTHAEKRAFMGKLK 390
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.887e-29 Identity = 59/92 (64.13%), Postives = 75/92 (81.52%), Query Frame = -2 Query: 216 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA*F 491 TEFD T+K ITPMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E I LK+IDTSSK GHGRFQTT EK + G+LK F Sbjct: 302 TEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDF 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.597e-28 Identity = 58/92 (63.04%), Postives = 74/92 (80.43%), Query Frame = -2 Query: 216 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA*F 491 TEFD T+K I PMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E I LK+IDTSSK GHGRFQTT EK + G+LK F Sbjct: 302 TEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDF 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3L_BOVIN (60S ribosomal protein L3-like OS=Bos taurus GN=RPL3L PE=2 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 2.086e-28 Identity = 58/89 (65.17%), Postives = 70/89 (78.65%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR ALE I+LKFIDT+SKFGHGRFQT QEK + G K Sbjct: 305 TSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQALENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3L_HUMAN (60S ribosomal protein L3-like OS=Homo sapiens GN=RPL3L PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 1.035e-27 Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A+E I+LKFIDT+SKFGHGRFQT QEK + G K Sbjct: 305 TSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVENIELKFIDTTSKFGHGRFQTAQEKRAFMGPQK 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.352e-27 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = -2 Query: 222 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 491 TEFD TEK I PMGGF HYG+V ++L++KGC GP+KR +TLR+S+ QT R ALE I LKFIDTSSKFGHG QT ++K KY+G K+ Sbjct: 304 TEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAEDKTKYFGVKKS 393 The following BLAST results are available for this feature:
BLAST of CB304600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304600 ID=CB304600; Name=CB304600; organism=Citrus sinensis; type=EST; length=492bpback to top |