CB304673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS15_ELAOL (40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.410e-61 Identity = 115/119 (96.64%), Postives = 116/119 (97.48%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DM DELVKLF ARARRRFQRGLKRKPMALIKKLRKAKR+APPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 35 DMGTDELVKLFHARARRRFQRGLKRKPMALIKKLRKAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 153
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS15_PICMA (40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 8.316e-60 Identity = 113/119 (94.96%), Postives = 117/119 (98.32%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DM+++ELVKLF ARARRRFQRGLKR+PMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 33 DMTSEELVKLFHARARRRFQRGLKRQPMALIKKLRKAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS15_ORYSJ (40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15 PE=2 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 2.420e-59 Identity = 111/119 (93.28%), Postives = 116/119 (97.48%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DMS D+LV+LF ARARRRFQRGLKRKPMALIKKLRKAK++AP GEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK Sbjct: 36 DMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAKKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 154
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS154_ARATH (40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 7.040e-59 Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DMS D+LVKLFS+R RRRF RGL RKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK Sbjct: 34 DMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS151_ARATH (40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 7.040e-59 Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DMS D+LVKLFS+R RRRF RGL RKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK Sbjct: 34 DMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS153_ARATH (40S ribosomal protein S15-3 OS=Arabidopsis thaliana GN=RPS15C PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.055e-55 Identity = 105/119 (88.24%), Postives = 110/119 (92.44%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DMS D+LVKLF +R RRRF RGL RKPMALIKKLRKAK EAP GEKP VRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GAT+SSRFIPLK Sbjct: 32 DMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 150
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS155_ARATH (40S ribosomal protein S15-5 OS=Arabidopsis thaliana GN=RPS15E PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54 Identity = 105/119 (88.24%), Postives = 110/119 (92.44%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DMS ++LVK FS+R RRRF RGL RKPMALIKKLRKAK EAP GEKP VRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GAT+SSRFIPLK Sbjct: 31 DMSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLRKAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATNSSRFIPLK 149
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS152_ARATH (40S ribosomal protein S15-2 OS=Arabidopsis thaliana GN=RPS15B PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.887e-52 Identity = 98/119 (82.35%), Postives = 108/119 (90.76%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DM D+LV+LF +R RRR RGL RKPMALIKKLRKAK +AP GEKPE VRTHLRNM+I+PEMIGSIIGVYNGKTFNQ+EIKPEMIGHYLAEFSI+YKPV+HG+PG GATHSSRFIPLK Sbjct: 34 DMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIGHYLAEFSITYKPVRHGKPGHGATHSSRFIPLK 152
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS15_RAT (40S ribosomal protein S15 OS=Rattus norvegicus GN=Rps15 PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 2.681e-50 Identity = 93/119 (78.15%), Postives = 110/119 (92.44%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DMS ++L++L+SAR RRR RGL+RK +L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGHYL EFSI+YKPVKHGRPGIGATHSSRFIPLK Sbjct: 27 DMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145
BLAST of CB304673 vs. ExPASy Swiss-Prot
Match: RS15_PONAB (40S ribosomal protein S15 OS=Pongo abelii GN=RPS15 PE=2 SV=3) HSP 1 Score: 198.364 bits (503), Expect = 2.681e-50 Identity = 93/119 (78.15%), Postives = 110/119 (92.44%), Query Frame = -1 Query: 284 DMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 640 DMS ++L++L+SAR RRR RGL+RK +L+K+LRKAK+EAPP EKPE V+THLR+MII+PEM+GS++GVYNGKTFNQVEIKPEMIGHYL EFSI+YKPVKHGRPGIGATHSSRFIPLK Sbjct: 27 DMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSSRFIPLK 145 The following BLAST results are available for this feature:
BLAST of CB304673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304673 ID=CB304673; Name=CB304673; organism=Citrus sinensis; type=EST; length=640bpback to top |