CB304707
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304707 vs. ExPASy Swiss-Prot
Match: TPPC5_DICDI (Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum GN=trappc5 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.288e-21 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = -2 Query: 349 TEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREA 594 TE +DEYMIS+ ++VN+FIS+PK + + NC AFVAGI+ G+L SA FPA VTAH V VEG++ P+T ILIKF EV+ R A Sbjct: 105 TEADDEYMISDNNMVVNKFISLPKHLSSLNCAAFVAGIIEGILCSAEFPARVTAHNVAVEGKRFPKTVILIKFNPEVIERNA 186
BLAST of CB304707 vs. ExPASy Swiss-Prot
Match: TRS31_SCHPO (Transport protein particle subunit trs31 OS=Schizosaccharomyces pombe GN=trs31 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.180e-15 Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = -2 Query: 340 EHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARLG 591 E DEYMI + L+N+FIS+PK+M NC A++AGI+ G LDSA FP +AH VP+ Q RT ILIK V+ RE LG Sbjct: 127 EASDEYMIVDNNPLLNKFISVPKEMNQLNCCAYLAGIIEGFLDSAQFPCKASAHSVPL-SQYPYRTVILIKLDPSVIAREEVLG 209
BLAST of CB304707 vs. ExPASy Swiss-Prot
Match: TPPC5_PLAFA (Trafficking protein particle complex subunit 5 OS=Plasmodium falciparum PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.180e-15 Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = -2 Query: 352 EYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRRE 579 EYMI +K +L+N+FI++PKD G NC AF AGIV G L S+ F A VTAH + EG TTI IKF EV+ RE Sbjct: 107 EYMICDKNILLNKFINVPKDYGNINCAAFAAGIVEGFLCSSEFQADVTAHTIH-EGDDNYNTTIFIKFYPEVVERE 181
BLAST of CB304707 vs. ExPASy Swiss-Prot
Match: TPPC5_PLAF7 (Trafficking protein particle complex subunit 5 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0358 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.180e-15 Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = -2 Query: 352 EYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRRE 579 EYMI +K +L+N+FI++PKD G NC AF AGIV G L S+ F A VTAH + EG TTI IKF EV+ RE Sbjct: 107 EYMICDKNILLNKFINVPKDYGNINCAAFAAGIVEGFLCSSEFQADVTAHTIH-EGDDNYNTTIFIKFYPEVVERE 181
BLAST of CB304707 vs. ExPASy Swiss-Prot
Match: TPPC5_CHICK (Trafficking protein particle complex subunit 5 OS=Gallus gallus GN=TRAPPC5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.138e-12 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = -2 Query: 343 EHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARL 591 + + Y + E+E LVN FIS+P++ T NC AF AG+V VL ++GFPA VTAH+ TT++IKF E V+ R+ L Sbjct: 110 DDDKTYYVIEREPLVNTFISVPRENSTLNCAAFTAGLVEAVLGASGFPAKVTAHW-------HKGTTLMIKFEEGVIARDKSL 185
BLAST of CB304707 vs. ExPASy Swiss-Prot
Match: TPPC5_MOUSE (Trafficking protein particle complex subunit 5 OS=Mus musculus GN=Trappc5 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.378e-12 Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = -2 Query: 343 YMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARL 576 + I E+E L+N +IS+PK+ T NC +F AGIV VL +GFPA VTAH+ TT++IKF E V+ R+ L Sbjct: 115 FYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARDRAL 185
BLAST of CB304707 vs. ExPASy Swiss-Prot
Match: TPPC5_HUMAN (Trafficking protein particle complex subunit 5 OS=Homo sapiens GN=TRAPPC5 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.378e-12 Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = -2 Query: 343 YMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARL 576 + I E+E L+N +IS+PK+ T NC +F AGIV VL +GFPA VTAH+ TT++IKF E V+ R+ L Sbjct: 115 FYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARDRAL 185
BLAST of CB304707 vs. ExPASy Swiss-Prot
Match: TPPC5_BOVIN (Trafficking protein particle complex subunit 5 OS=Bos taurus GN=TRAPPC5 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.378e-12 Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = -2 Query: 343 YMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARL 576 + I E+E L+N +IS+PK+ T NC +F AGIV VL +GFPA VTAH+ TT++IKF E V+ R+ L Sbjct: 115 FYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARDRAL 185 The following BLAST results are available for this feature:
BLAST of CB304707 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304707 ID=CB304707; Name=CB304707; organism=Citrus sinensis; type=EST; length=598bpback to top |