CB304712
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.322e-46 Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = -1 Query: 241 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 516 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVS+HSKYFCEFCG+YAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_ORYSJ (60S ribosomal protein L37a OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 6.951e-46 Identity = 87/92 (94.57%), Postives = 92/92 (100.00%), Query Frame = -1 Query: 241 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 516 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVS+HSKYFCEFCG++AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+ Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_PSEMZ (60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 5.885e-45 Identity = 86/91 (94.51%), Postives = 90/91 (98.90%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVS+HSK+FCEFCG++AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: R37A1_ARATH (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.311e-44 Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = -1 Query: 241 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 516 MTKRTKKA IVGKYGTRYGASLRKQIKKMEVS+H+KYFCEFCG+Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES Sbjct: 1 MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: R37A2_ARATH (60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 8.497e-44 Identity = 83/91 (91.21%), Postives = 87/91 (95.60%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 M KRTKK GIVGKYGTRYGAS+RKQIKKMEVS+HSKYFCEFCG+Y VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_BRARA (60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 2.093e-42 Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS-TIRRLREQTE 516 M KRTKK GIVGKYGTRYGAS+RKQIKKMEVS+HSKYFCEFCG+Y VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRS TIRRLREQ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSHTIRRLREQIE 92
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_OSTLU (60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain CCE9901) GN=RPL37a PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.458e-37 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 M KRTKK GIVGKYGTRYGASLRK +KK EVS+HSK+FC+FCG+Y +KRKAVGIW CK C K KAGGAY+LNT +VTVRSTIRRLRE TE Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYGMKRKAVGIWSCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_OSTTA (60S ribosomal protein L37a OS=Ostreococcus tauri GN=RPL37a PE=3 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.927e-36 Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = -1 Query: 244 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 516 M KRTKK GIVGKYGTRYGASLRK +KK EVS+HSK+FC+FCG+Y +KR+AVGIW CK C K KAGGAY+LNT +VTVRSTIRRLRE TE Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKVVKKTEVSQHSKFFCDFCGKYGMKRQAVGIWCCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_CRYST (60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A PE=3 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.041e-33 Identity = 66/92 (71.74%), Postives = 78/92 (84.78%), Query Frame = -1 Query: 241 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 516 M KRTKK GIVGKYGTRYGASLRK +KKME+++HSKY C+FCG+ A+KR+AVGIWGCK C KV AGGA+ +T +AVTVRS +RRLRE ES Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKTVKKMEITQHSKYTCQFCGKDAMKRQAVGIWGCKSCRKVVAGGAWVYSTMAAVTVRSAVRRLREMKES 92
BLAST of CB304712 vs. ExPASy Swiss-Prot
Match: RL37A_DICDI (60S ribosomal protein L37a OS=Dictyostelium discoideum GN=rpl37A PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.703e-31 Identity = 61/88 (69.32%), Postives = 73/88 (82.95%), Query Frame = -1 Query: 253 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSRHSKYFCEFCGEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 516 M KRTKK G+VGKYGTRYGASLRKQ+KKME+++H Y C FCG+ AV+R +VGIW C C KV AGGA+T++TA+ TVRSTIRRLRE Sbjct: 1 MAKRTKKVGVVGKYGTRYGASLRKQVKKMEITQHGTYTCSFCGKDAVRRSSVGIWKCNGCRKVLAGGAWTMSTAAGATVRSTIRRLRE 88 The following BLAST results are available for this feature:
BLAST of CB304712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304712 ID=CB304712; Name=CB304712; organism=Citrus sinensis; type=EST; length=564bpback to top |