CB304810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.032e-23 Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = -1 Query: 414 EAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 593 +AF +GDI +SKIINDRETGRSRGFGFVTF+DEKSMRDAIEGMNGQ LDGRN TVNEAQ Sbjct: 24 QAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.672e-22 Identity = 49/59 (83.05%), Postives = 56/59 (94.92%), Query Frame = -1 Query: 414 AFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 590 AF YG++L+SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ TVNEAQ Sbjct: 27 AFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22 Identity = 48/59 (81.36%), Postives = 56/59 (94.92%), Query Frame = -1 Query: 414 AFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 590 AF YGD+++SKIINDRETGRSRGFGFVTF+DEK+M+DAIEGMNGQ+LDGR+ TVNEAQ Sbjct: 27 AFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.262e-21 Identity = 47/59 (79.66%), Postives = 56/59 (94.92%), Query Frame = -1 Query: 414 AFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 590 AF +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ TVNEAQ Sbjct: 27 AFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.117e-19 Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = -1 Query: 414 HEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 596 H AF YG++LESKII DRET RSRGFGFVTF E++MR AIEGMNG+ LDGRN TVNEAQ Sbjct: 4 HSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.612e-19 Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = -1 Query: 414 AFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 590 AF YGD+++SKII DRETGRSRGFGFVTF +++MR AIE MNGQ+LDGRN TVNEAQ Sbjct: 25 AFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.612e-19 Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = -1 Query: 414 FGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 587 F +GD+++SKIINDRE+GRSRGFGFVTF+DEK+MRDAIE MNG+ LDGR TVNEAQ Sbjct: 26 FSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.612e-19 Identity = 43/58 (74.14%), Postives = 52/58 (89.66%), Query Frame = -1 Query: 414 FGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 587 F +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAI+ MNG+ LDGR TVNEAQ Sbjct: 26 FSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.051e-18 Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = -1 Query: 414 AFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 590 AF +YG+IL+SK+I DRETGRSRGFGFVTF E SM DAIE MNG+ LDGRN TVN+AQ Sbjct: 27 AFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CB304810 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.162e-17 Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = -1 Query: 414 EAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNNTVNEAQ 593 +AF +G +++SK+I DRETGRSRGFGFVTF E+SM DAIE MNG+ LDGRN TVN+AQ Sbjct: 26 QAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85 The following BLAST results are available for this feature:
BLAST of CB304810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304810 ID=CB304810; Name=CB304810; organism=Citrus sinensis; type=EST; length=596bpback to top |