CB304814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.303e-34 Identity = 73/97 (75.26%), Postives = 83/97 (85.57%), Query Frame = -3 Query: 211 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSRAPGGG--EKKK 495 KGH+VT++EL PRP RKGKTSKR F+R +I+EVAG APYEKRITEL +VGKDKRALKVAKRKLGTHKRAK+KREEM + LRK R+ GGG EKKK Sbjct: 16 KGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGGGATEKKK 112
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.008e-34 Identity = 73/97 (75.26%), Postives = 83/97 (85.57%), Query Frame = -3 Query: 211 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSRAPGGG--EKKK 495 KGH+VTK+E PPRP +RKGKTSKR F+R +I+EVAG APYEKRITEL +VGKDKRALKVAKRKLGTHKRAK+KREEM + LRK R+ G G EKKK Sbjct: 12 KGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGASEKKK 108
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.547e-33 Identity = 72/97 (74.23%), Postives = 81/97 (83.51%), Query Frame = -3 Query: 214 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSRAPGG---GEKK 495 KGH+VT++EL PRP RKGKTSKR F+R +IREVAG APYEKRITEL +VGKDKRALKVAKRKLGTHKRAK+KREEM + LRK R+ GG EKK Sbjct: 16 KGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAAAAEKK 112
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_ENTCP (60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.036e-26 Identity = 61/92 (66.30%), Postives = 70/92 (76.09%), Query Frame = -3 Query: 220 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSRAPGGGE 495 KGH VTKK PRP+ RKG S+RV VR V+REVAG+APYE+R+ EL +VGKDKRALK+ KRKLGTH R KKKREEM LRK +A GE Sbjct: 10 KGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKRALKMCKRKLGTHMRGKKKREEMAGVLRKMQAASKGE 101
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.146e-25 Identity = 60/88 (68.18%), Postives = 69/88 (78.41%), Query Frame = -3 Query: 268 NSQILVSLLD*TKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKRE 531 N+ + V L KGHIVTKKEL PRP+DRKGKTSKR HFVR +IREVAGF PYEKRITEL +VGKDKRALKV + K+G H + K+ E Sbjct: 7 NTGLFVGL---NKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36A_SCHPO (60S ribosomal protein L36-A OS=Schizosaccharomyces pombe GN=rpl36a PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 9.079e-23 Identity = 50/86 (58.14%), Postives = 69/86 (80.23%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KG ++TK++LP RP+ RKG+ SKR FVR+++REVAGFAPYE+R+ EL R +DKRA K+AK++LGT KRAK K EE+ + ++ SR Sbjct: 11 KGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_IXOSC (60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.549e-22 Identity = 52/94 (55.32%), Postives = 64/94 (68.09%), Query Frame = -3 Query: 214 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSRAPGGGEKK 495 KGH VTK E PRP+ RKG SK FVR +IREV GFAP+E+R EL +V KDKRALK K++LGTH R K+KR+E+ N L R ++K Sbjct: 13 KGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKDKRALKFIKKRLGTHLRGKRKRDELSNVLVAQRKAAAHKEK 106
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36B_SCHPO (60S ribosomal protein L36-B OS=Schizosaccharomyces pombe GN=rpl36b PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.885e-22 Identity = 50/86 (58.14%), Postives = 67/86 (77.91%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KG +TK++LP RP+ RKG SKR FVR+++REVAGFAPYE+R+ EL R +DKRA K+AK++LGT KRAK K EE+ + ++ SR Sbjct: 11 KGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_XENTR (60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.498e-21 Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH VTK PR R+G+ +K FVR +IREV GFAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N L R Sbjct: 13 KGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMR 98
BLAST of CB304814 vs. ExPASy Swiss-Prot
Match: RL36_XENLA (60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.498e-21 Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = -3 Query: 238 KGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELFRVGKDKRALKVAKRKLGTHKRAKKKREEMFNALRKSR 495 KGH VTK PR R+G+ +K FVR +IREV GFAPYE+R EL +V KDKRALK K+++GTH RAK+KREE+ N L R Sbjct: 13 KGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMR 98 The following BLAST results are available for this feature:
BLAST of CB304814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304814 ID=CB304814; Name=CB304814; organism=Citrus sinensis; type=EST; length=593bpback to top |