CB304982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304982 vs. ExPASy Swiss-Prot
Match: NOC3L_DANRE (Nucleolar complex protein 3 homolog OS=Danio rerio GN=noc3l PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.025e-20 Identity = 60/187 (32.09%), Postives = 97/187 (51.87%), Query Frame = -1 Query: 98 KLGFLSLLAVFKDIIPGYRIRLPTEKELEMKVSKEVKKMRFYESTLLSAYKAYLQKL-----------------IASEKQPVFHQVVVRCICNLLDAVPHFNCCEILLEVVVRNLGSQDVVVRKLCCATIKSLFTNEGKHGGAATVEAVRLIANHEKVKNCQLHPDFVEVFMSLPFDEDLQRREVPD 607 KL +SL+ VFKDI+P YRIR TE+E KV KE ++R +E L+S YK YL++L ++ + +V VRCIC LL A+PHFN ++ ++V + D V ++CC +K L + G A++ V++I+ K +N ++ P + + L E +++ D Sbjct: 256 KLVMVSLMEVFKDIVPAYRIRPLTEEEKAAKVKKETLQLREFEEGLVSQYKFYLEELEQTVKDWKQKKEKRSQAVSLQSYKGLAEVAVRCICELLVALPHFNFHNNIIVMLVPLMNDSDKKVSEMCCEAVKKLLKQD--KVGQASLAMVKVISGMVKSRNYRIKPVVLNCLLCLRIKEVDMKKDTED 440
BLAST of CB304982 vs. ExPASy Swiss-Prot
Match: NOC3L_CRIGR (Nucleolar complex protein 3 homolog OS=Cricetulus griseus GN=NOC3L PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 55/187 (29.41%), Postives = 98/187 (52.41%), Query Frame = -1 Query: 98 KLGFLSLLAVFKDIIPGYRIRLPTEKELEMKVSKEVKKMRFYESTLLSAYKAYLQKL-----------------IASEKQPVFHQVVVRCICNLLDAVPHFNCCEILLEVVVRNLGSQDVVVRKLCCATIKSLFTNEGKHGGAATVEAVRLIANHEKVKNCQLHPDFVEVFMSLPFDEDLQRREVPD 607 KL +SL+ +FKDI P Y+IR TE E K+ KE +K+R +E L+S YK YL+ L ++ + +V V+ +C LL A+PHFN ++ ++V + +V ++CC +K LF + G A++ +++I+ K +N ++ P+ ++ F+ L E +++ D Sbjct: 256 KLVIISLMELFKDITPSYKIRPLTEAEKSTKIRKETQKLREFEEGLVSQYKFYLENLEQIVKDWKQRKLKKSNVVSLKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDGSKLVSEMCCEAVKKLFKQDKL--GQASLGVIKVISGFVKGRNYEVRPEMLKTFLCLRIKEVEVKKDTED 440
BLAST of CB304982 vs. ExPASy Swiss-Prot
Match: NOC3L_MOUSE (Nucleolar complex protein 3 homolog OS=Mus musculus GN=Noc3l PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19 Identity = 55/187 (29.41%), Postives = 97/187 (51.87%), Query Frame = -1 Query: 98 KLGFLSLLAVFKDIIPGYRIRLPTEKELEMKVSKEVKKMRFYESTLLSAYKAYLQKL-----------------IASEKQPVFHQVVVRCICNLLDAVPHFNCCEILLEVVVRNLGSQDVVVRKLCCATIKSLFTNEGKHGGAATVEAVRLIANHEKVKNCQLHPDFVEVFMSLPFDEDLQRREVPD 607 KL +SL+ +FKDI P Y+IR TE E K+ KE +K+R +E L+S YK YL+ L ++ + +V V+ +C LL A+PHFN ++ ++V + V ++CC +K LF + G A++ +++I+ K +N ++ P+ ++ F+ L E +++ D Sbjct: 255 KLVIISLMELFKDITPSYKIRPLTEAEKSTKIRKETQKLREFEEGLVSQYKFYLENLEQIVKDWKQRKLKKSNVVSLKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDGSKPVSEMCCEAVKKLFKQDKL--GQASLGVIKVISGFVKGRNYEVRPEMLKTFLCLRIKEVEVKKDTED 439
BLAST of CB304982 vs. ExPASy Swiss-Prot
Match: NOC3L_HUMAN (Nucleolar complex protein 3 homolog OS=Homo sapiens GN=NOC3L PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19 Identity = 54/187 (28.88%), Postives = 97/187 (51.87%), Query Frame = -1 Query: 98 KLGFLSLLAVFKDIIPGYRIRLPTEKELEMKVSKEVKKMRFYESTLLSAYKAYLQKL-----------------IASEKQPVFHQVVVRCICNLLDAVPHFNCCEILLEVVVRNLGSQDVVVRKLCCATIKSLFTNEGKHGGAATVEAVRLIANHEKVKNCQLHPDFVEVFMSLPFDEDLQRREVPD 607 KL +SL+ +FKDI P Y+IR TE E K KE +K+R +E L+S YK YL+ L ++ + +V V+ +C LL A+PHFN ++ ++V + ++ ++CC +K LF + G A++ +++I+ K +N ++ P+ ++ F+ L E +++ D Sbjct: 256 KLVIVSLMELFKDITPSYKIRPLTEAEKSTKTRKETQKLREFEEGLVSQYKFYLENLEQMVKDWKQRKLKKSNVVSLKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDMSKLISEMCCEAVKKLFKQDKL--GQASLGVIKVISGFVKGRNYEVRPEMLKTFLCLRIKEVEVKKDTED 440
BLAST of CB304982 vs. ExPASy Swiss-Prot
Match: NOC3L_PONAB (Nucleolar complex protein 3 homolog OS=Pongo abelii GN=NOC3L PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.233e-18 Identity = 53/187 (28.34%), Postives = 95/187 (50.80%), Query Frame = -1 Query: 98 KLGFLSLLAVFKDIIPGYRIRLPTEKELEMKVSKEVKKMRFYESTLLSAYKAYLQKL-----------------IASEKQPVFHQVVVRCICNLLDAVPHFNCCEILLEVVVRNLGSQDVVVRKLCCATIKSLFTNEGKHGGAATVEAVRLIANHEKVKNCQLHPDFVEVFMSLPFDEDLQRREVPD 607 KL +SL+ +FKDI P Y+IR TE E K KE +K+R +E L+S YK YL+ L ++ + +V V+ +C LL A+PHFN ++ ++V + + ++CC +K LF + G A++ +++I+ K + ++ P+ ++ F+ L E +++ D Sbjct: 256 KLVIVSLMELFKDITPSYKIRPLTEAEKSTKTRKETQKLREFEEGLVSQYKFYLENLEQMVKDWKQRKLKKSNVVSLKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMNDMSKSISEMCCEAVKKLFKQDKL--GQASLGVIKVISGFVKGRKYEVRPEMLKTFLCLRIKEVEVKKDTED 440
BLAST of CB304982 vs. ExPASy Swiss-Prot
Match: NOC3_SCHPO (Nucleolar complex-associated protein 3 OS=Schizosaccharomyces pombe GN=noc3 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.203e-18 Identity = 61/182 (33.52%), Postives = 96/182 (52.75%), Query Frame = -1 Query: 107 KLGFLSLLAVFKDIIPGYRIRLPTEKELEMKVSKEVKKMRFYESTLLSAYKAYLQKL---------IASEKQPVFHQVVVRCICNLLDAVPHFNCCEILLEVVVRNLGSQ------DVVVRKLCCATIKSLFTNEGKHGGAATVEAVRLIANHEKVKNCQLHPDFVEVFMSLPFDEDLQRRE 607 KL L+LLAVF+DIIPGY+IR +E+E K+SKEV + YE TLL Y +LQ L E Q +QV VRC L++ HFN E L + VR + + D ++ L K++F E + G +++ V +++ K +N + PD ++F+S+ D++ ++ Sbjct: 258 KLSLLTLLAVFRDIIPGYKIRPLSEEEQGTKLSKEVAQRWEYEQTLLKHYAKFLQTLETILKSFSSTLDETQLSLYQVAVRCCTKLIEQASHFNLSEKLFALAVRQISHKTKRPGFDGIINSL-----KNIF--EEDNLGKTSLKCVTILSRMFKQRNYDVLPDVYDLFLSVNILNDMKIKD 432
BLAST of CB304982 vs. ExPASy Swiss-Prot
Match: NOC3L_XENLA (Nucleolar complex protein 3 homolog OS=Xenopus laevis GN=noc3l PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.150e-15 Identity = 54/187 (28.88%), Postives = 97/187 (51.87%), Query Frame = -1 Query: 98 KLGFLSLLAVFKDIIPGYRIRLPTEKELEMKVSKEVKKMRFYESTLLSAYKAYLQKL---------IASEKQPV--------FHQVVVRCICNLLDAVPHFNCCEILLEVVVRNLGSQDVVVRKLCCATIKSLFTNEGKHGGAATVEAVRLIANHEKVKNCQLHPDFVEVFMSLPFDEDLQRREVPD 607 KL LSL+ VFKDI P Y+IR TE E +V K+ +K+R +E L+S YK YL+ L + ++K V ++ V+C+C L+ ++ HFN ++ +VV + + + +L + LF + G A++ AV++I+ K +N + P+ +++ + L E +++ D Sbjct: 254 KLVMLSLMEVFKDITPSYKIRPLTEAEKAARVKKDTQKLREFEEGLISQYKFYLENLEQILKDWKQMKTKKSEVVSLHAYKGLAEIAVKCLCELMVSLSHFNFHNNIIVLVVPLVNDKCRQISELSMEATRKLFRQD--KFGHASLAAVKVISGLVKSRNYDVRPEVLQLLLHLRIKEVEVKKDTED 438
BLAST of CB304982 vs. ExPASy Swiss-Prot
Match: NOC3_YEAST (Nucleolar complex-associated protein 3 OS=Saccharomyces cerevisiae GN=NOC3 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11 Identity = 49/167 (29.34%), Postives = 79/167 (47.31%), Query Frame = -1 Query: 137 KLGFLSLLAVFKDIIPGYRIRLPTEKELEMKVSKEVKKMRFYESTLLSAYKAYLQKLIASEKQP--------VFHQVVVRCICNLLDAVPHFNCCEILLEVVVRNLGSQDVVVRKLCCATIKSLFT--NEGKHGGAATVEAVRLIANHEKVKNCQLHPDFVEVFMSL 607 K L+L+ VFK IIPGYRIR TE E + KVSKEV K+R +E L+ YK Y+ +L + K P + + L+ HFN + +++R + + I++ T NE + G+ + E +R+ K +N + + + +SL Sbjct: 175 KFSMLALVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSNAAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFETLLNEDEE-GSISFEILRIFNKILKTRNFNIEESVLNMLLSL 340 The following BLAST results are available for this feature:
BLAST of CB304982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304982 ID=CB304982; Name=CB304982; organism=Citrus sinensis; type=EST; length=610bpback to top |