CB305034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 2.280e-60 Identity = 114/129 (88.37%), Postives = 118/129 (91.47%), Query Frame = -1 Query: 33 INPSTLATSVNGFKCLPLATNRAAIRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEIRNILRNIPN 419 INPSTL TSVN FKCLPLATN+AAIRIMAK KPVQCL+S KYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDE YKRRAEEL+GKVK AIKDV EPLDQLELIDNLQRLGLA+ FE EIRNIL NI N Sbjct: 5 INPSTLVTSVNAFKCLPLATNKAAIRIMAKYKPVQCLISAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDEAYKRRAEELRGKVKIAIKDVIEPLDQLELIDNLQRLGLAHRFETEIRNILNNIYN 133
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.204e-22 Identity = 55/113 (48.67%), Postives = 74/113 (65.49%), Query Frame = -1 Query: 33 LATNRAAIRIMAKNKPVQCLVSTKYDNLT-VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEIRNILRNIPN 368 L T+R +A+ PVQC+V+ K + RRSANYQPSIW+HD+++SL Y ET R+ LK +V+ + V PL+QLELI+ LQRLGL+YHFE EI+ IL + N Sbjct: 27 LVTSRTRNGYLAR--PVQCMVANKVSTSPDILRRSANYQPSIWNHDYIESLRIEYVGETCTRQINVLKEQVRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYN 137
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18 Identity = 48/95 (50.53%), Postives = 61/95 (64.21%), Query Frame = -1 Query: 45 PVQCLV--STKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEIRNILR 323 P+QC + S D T+ RRSANY P IW DF+QSL Y E Y R+ +LK +VK + + L QLELID LQRLG++YHFE EI +IL+ Sbjct: 53 PIQCSLAKSPSSDTSTIVRRSANYDPPIWSFDFIQSLPCKYKGEPYTSRSNKLKEEVKKMLVGMENSLVQLELIDTLQRLGISYHFENEIISILK 147
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.071e-17 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = -1 Query: 39 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEIRNILRNI 281 V RRSANYQPS+W H++L SL + Y E R LK +V + + L+QLELID LQRLG++YHFE EI+ L N+ Sbjct: 24 VSRRSANYQPSLWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNV 104
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.679e-16 Identity = 50/129 (38.76%), Postives = 72/129 (55.81%), Query Frame = -1 Query: 45 PSTLATSVNGFKCLPLATNRAAIRIMAKNKPVQCLVSTKYDNLTV------DRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEIRNILR 413 P T TS++ K P +++ ++ +++ + T DN + DRRSANY P IW DF+QSL Y E+Y R +L+ VK + V L QLELID +QRLG++Y FE EI +IL+ Sbjct: 27 PKTSITSIS--KPKPKLKSKSNLKSRSRSSTCYSIQCTVVDNPSSTITNNSDRRSANYGPPIWSFDFVQSLPIQYKGESYTSRLNKLEKDVKRMLIGVENSLAQLELIDTIQRLGISYRFENEIISILK 153
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15 Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = -1 Query: 42 LTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDV--TEPLDQLELIDNLQRLGLAYHFEPEIRNILRN 287 L + RRS NYQPS WDH +L S+ + Y +E LK KVK +++V L++LELID+LQ+LG++YHFE EI NIL N Sbjct: 43 LDLRRRSGNYQPSSWDHSYLLSIENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELIDDLQKLGVSYHFEQEINNILTN 126
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15 Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = -1 Query: 48 TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEIRNIL 284 TV RRSANYQPS WDH L S+ + + + R + LK KV+ + D + LDQLE ID+LQ+LG++YHFE EI NIL Sbjct: 43 TVQRRSANYQPSRWDHHHLLSVENKFAKDKRVRERDLLKEKVRKMLNDEQKTYLDQLEFIDDLQKLGVSYHFEAEIDNIL 122
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15 Identity = 39/81 (48.15%), Postives = 57/81 (70.37%), Query Frame = -1 Query: 33 RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEIRNILRNIPN 275 RRS +YQPS+WD +++QSLN+ Y ++ + R EL +V+ +K E + QLELID+LQ LGL+Y F+ EI+ IL +I N Sbjct: 52 RRSGDYQPSLWDFNYIQSLNTPYKEQRHFNRQAELIMQVRMLLKVKMEAIQQLELIDDLQYLGLSYFFQDEIKQILSSIHN 132
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.977e-15 Identity = 48/130 (36.92%), Postives = 75/130 (57.69%), Query Frame = -1 Query: 33 INPSTLATSVNGFKCLPLATNRAA-IRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEIRNILRNIPN 419 +N S L+ +N L ++A + A ++ S+K RRS NYQP++WD +++QSLN+ YT+E + R EL +V+ +K+ EP+ QLELI +L+ LGL+ F+ EI+ IL I N Sbjct: 6 MNVSILSKPLNCLHNLERRPSKALLVPCTAPTARLRASCSSKLQEAHQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYN 135
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.448e-14 Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = -1 Query: 39 NRAAIRIMAKNKPVQCLVSTKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEIRNILRNI 359 +R + M K P LV + RRS NYQPS W+H +L S+ + Y ET + LK KVK+ + D + L+QLELID+LQ+LG++YHFE EI + L ++ Sbjct: 26 HRFVCKSMTKTTPDTTLVE-------LSRRSGNYQPSPWNHCYLLSIENKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDL 126 The following BLAST results are available for this feature:
BLAST of CB305034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305034 ID=CB305034; Name=CB305034; organism=Citrus sinensis; type=EST; length=419bpback to top |