CB305045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305045 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.147e-33 Identity = 67/100 (67.00%), Postives = 80/100 (80.00%), Query Frame = -3 Query: 203 GMAKSVYTKYEPAANELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSNGVVESQPL 502 GMAKSVY+KYEPAA ELY+ YEPKAEQ AVSAW+KLNQ+PLF A+CSEKYN TVV AAEKGY+V+SY+PLVPTERI+K+F+ E++PL Sbjct: 141 GMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240
BLAST of CB305045 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.159e-25 Identity = 57/92 (61.96%), Postives = 67/92 (72.83%), Query Frame = -3 Query: 224 MAKSVYTKYEPAANELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSNG 499 + K+VY+K EP A EL SKYEP AEQYAVSAWR LN++PLF AY SEKYNQ+V AE+GY V+ YLPL+PTERIAKVF +G Sbjct: 140 ITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQDG 231
BLAST of CB305045 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 7.449e-24 Identity = 53/78 (67.95%), Postives = 62/78 (79.49%), Query Frame = -3 Query: 230 ANELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFS 463 A +YSKYEP AEQ AVSAWRKLNQ+PLF AYC+EKYN+ +VS+AEKGY+VS+YLPLVPTE+IAKVFS Sbjct: 88 AKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVFS 165
BLAST of CB305045 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.361e-17 Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = -3 Query: 227 MAKSVY-TKYEPAANELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSN 499 +A SV+ T + A LY+ EPKAEQYAV WR LN++PL Y SEKYN V E+GY+VSSYLPL+PTE+I KVF + Sbjct: 110 VASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVFGD 201
BLAST of CB305045 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.274e-15 Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 194 GMAKSVYTKYEPAANELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSNGVVESQPLASA 502 G+AKS + EP A +LY++YEP AE+ A AW LN++PL A S +YN V A++G V++YLPLVPTER+++VF PLA A Sbjct: 143 GLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF------GYPLADA 239
BLAST of CB305045 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.274e-15 Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 194 GMAKSVYTKYEPAANELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSNGVVESQPLASA 502 G+AKS + EP A +LY++YEP AE+ A AW LN++PL A S +YN V A++G V++YLPLVPTER+++VF PLA A Sbjct: 143 GLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF------GYPLADA 239
BLAST of CB305045 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.445e-11 Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = -3 Query: 236 ANELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXAYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKV 463 A + KYEP AE YA + WR LNQ+PLF Y SEKYN V ++ Y + YLP++P E+I+ + Sbjct: 151 ARSVRDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIEKISDI 226 The following BLAST results are available for this feature:
BLAST of CB305045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB305045 ID=CB305045; Name=CB305045; organism=Citrus sinensis; type=EST; length=504bpback to top |