CB610989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_HEVBR (Superoxide dismutase [Mn], mitochondrial OS=Hevea brasiliensis GN=SODA PE=2 SV=1) HSP 1 Score: 380.948 bits (977), Expect = 4.221e-105 Identity = 185/231 (80.09%), Postives = 198/231 (85.71%), Query Frame = 1 Query: 70 MALRSLATRKAI--GLGKSVGLG-LRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 753 MALRSL TRK + + GLG LRGLQT +LPDLPYDY ALEPAISGEIMQLHHQKHHQ Y+TNYNKA+EQL A+ K D++ VV+LQ AIKFNGGGHVNHSIFWKNLAPV EGGGE PH SLGWAID FG LE LIQ M+AEGAALQGSGWVWL LD E K+LVVETTANQDPLVTK PTLVPLLGIDVWEHAYYLQYKNV+PDYLKNIW VMNWKYAS+VY KECP Sbjct: 1 MALRSLVTRKNLPSAFKAATGLGQLRGLQTFSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKALEQLNDAIEKGDSAAVVKLQSAIKFNGGGHVNHSIFWKNLAPVREGGGELPHGSLGWAIDADFGSLEKLIQLMNAEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYAKECP 231
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_NICPL (Superoxide dismutase [Mn], mitochondrial OS=Nicotiana plumbaginifolia GN=SODA PE=1 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 2.095e-104 Identity = 175/228 (76.75%), Postives = 196/228 (85.96%), Query Frame = 1 Query: 70 MALRSLATRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 753 MALR+L +R+ + G LRGLQT +LPDLPYDY ALEPAISG+IMQLHHQ HHQ YVTNYNKA+EQL A++K D TV +L AIKFNGGGH+NHSIFWKNLAPV EGGGEPP SLGWAIDT+FG LEAL+QKM+AEGAALQGSGWVWLG+D E KRLV+ETTANQDPLV+K LVPLLGIDVWEHAYYLQYKNV+PDYLKNIW VMNWKYA++VY+KECP Sbjct: 1 MALRTLVSRRTLATGLGFRQQLRGLQTFSLPDLPYDYGALEPAISGDIMQLHHQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGHINHSIFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLGVDKELKRLVIETTANQDPLVSKGANLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYANEVYEKECP 228
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_PRUPE (Superoxide dismutase [Mn], mitochondrial OS=Prunus persica GN=SOD PE=2 SV=1) HSP 1 Score: 377.096 bits (967), Expect = 6.095e-104 Identity = 176/228 (77.19%), Postives = 196/228 (85.96%), Query Frame = 1 Query: 70 MALRSLATRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 753 MALR+L +R+ + G LRGLQT +LPDLPY+Y ALEPAISG+IMQLHHQ HHQ YVTNYNKA+EQL A++K D TV +L AIKFNGGGH+NHSIFWKNLAPV EGGGEPP SLGWAIDT+FG LEAL+QKM+AEGAALQGSGWVWL LD E K+LVVETTANQDPLVTK PTLVPLLGIDVWEHAYYLQYKNV+PDYLKNIW V+NWKYAS+VY+KE P Sbjct: 1 MALRTLVSRRTLATGLGFRQQLRGLQTFSLPDLPYNYGALEPAISGDIMQLHHQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGHINHSIFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKESP 228
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_CAPAN (Superoxide dismutase [Mn], mitochondrial OS=Capsicum annuum GN=SODA PE=2 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 4.829e-101 Identity = 173/228 (75.88%), Postives = 194/228 (85.09%), Query Frame = 1 Query: 70 MALRSLATRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 753 MALR+L T+K + LR +QT +LPDL YDY ALEPAISGEIMQLHHQKHHQ Y+TNYN A++QL A+NK D+ TV +LQGAIKFNGGGH+NHS+FWKNLAP EGGGEPP SLG AIDT+FG LEA+IQKM+AEGAALQGSGWVWLGLD E KRLV+ETTANQDPLV K P LVPLLGIDVWEHAYYLQYKNVKPDYLKNIW V+NWKYA++VY+KECP Sbjct: 1 MALRNLMTKKPFAGILTFRQQLRCVQTFSLPDLSYDYGALEPAISGEIMQLHHQKHHQTYITNYNNALQQLHDAINKGDSPTVAKLQGAIKFNGGGHINHSVFWKNLAPTREGGGEPPKGSLGSAIDTNFGSLEAVIQKMNAEGAALQGSGWVWLGLDKELKRLVIETTANQDPLVIKGPNLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWKVINWKYAAEVYEKECP 228
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_ARATH (Superoxide dismutase [Mn], mitochondrial OS=Arabidopsis thaliana GN=SODA PE=1 SV=2) HSP 1 Score: 365.54 bits (937), Expect = 1.835e-100 Identity = 174/229 (75.98%), Postives = 197/229 (86.03%), Query Frame = 1 Query: 70 MALRSLATRKAIGLGKSVG---LGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 747 MA+R +A+RK + K L +RG+QT TLPDLPYDY ALEPAISGEIMQ+HHQKHHQAYVTNYN A+EQL QA+NK D STVV+LQ AIKFNGGGHVNHSIFWKNLAP EGGGEPP SLG AID HFG LE L++KMSAEGAA+QGSGWVWLGLD E K+LVV+TTANQDPLVTK +LVPL+GIDVWEHAYYLQYKNV+P+YLKN+W V+NWKYAS+VY+KE Sbjct: 1 MAIRCVASRKTLAGLKETSSRLLRIRGIQTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPKGSLGSAIDAHFGSLEGLVKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEKE 229
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM1_MAIZE (Superoxide dismutase [Mn] 3.1, mitochondrial OS=Zea mays GN=SODA.4 PE=2 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 8.822e-95 Identity = 166/231 (71.86%), Postives = 188/231 (81.39%), Query Frame = 1 Query: 70 MALRSLATRKAI-----GLGK--SVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 741 MALR+LA++K + G G+ + RG+ TVTLPDL YD+ ALEPAISGEIM+LHHQKHH YV NYNKA+EQL A++K D S VVQLQ AIKFNGGGHVNHSIFWKNL P+ EGGGEPPH LGWAID FG EAL++KM+AEGAALQGSGWVWL LD E K++ VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 1 MALRTLASKKVLSFPFGGAGRPLAAAASARGVTTVTLPDLSYDFGALEPAISGEIMRLHHQKHHATYVANYNKALEQLETAVSKGDASAVVQLQAAIKFNGGGHVNHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKKMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 231
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_ORYSJ (Superoxide dismutase [Mn], mitochondrial OS=Oryza sativa subsp. japonica GN=SODA PE=2 SV=2) HSP 1 Score: 345.51 bits (885), Expect = 1.965e-94 Identity = 165/227 (72.69%), Postives = 182/227 (80.18%), Query Frame = 1 Query: 70 MALRSLATRK---AIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 741 MALR+LA+RK A L + RG+ TV LPDLPYDY ALEPAISGEIM+LHHQKHH YV NYNKA+EQL A+ K D +V LQ AIKFNGGGHVNHSIFW NL P+ EGGG+PPH+ LGWAID FG EAL++KMSAEGAALQGSGWVWL LD E K+L VETTANQDPLVTK LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 1 MALRTLASRKTLAAAALPLAAAAAARGVTTVALPDLPYDYGALEPAISGEIMRLHHQKHHATYVANYNKALEQLDAAVAKGDAPAIVHLQSAIKFNGGGHVNHSIFWNNLKPISEGGGDPPHAKLGWAIDEDFGSFEALVKKMSAEGAALQGSGWVWLALDKEAKKLSVETTANQDPLVTKGANLVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVYE 227
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM4_MAIZE (Superoxide dismutase [Mn] 3.4, mitochondrial OS=Zea mays GN=SODA.3 PE=2 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 2.567e-94 Identity = 165/229 (72.05%), Postives = 185/229 (80.79%), Query Frame = 1 Query: 70 MALRSLATRKAI-----GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 741 MALR+LA++ A+ G + RG+ TV LPDL YD+ ALEPAISGEIM+LHHQKHH YV NYNKA+EQL A+ K D S VVQLQGAIKFNGGGHVNHSIFWKNL P+ EGGGEPPH LGWAID FG EAL+++M+AEGAALQGSGWVWL LD E K+L VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 1 MALRTLASKNALSFALGGAARPSAASARGVTTVALPDLSYDFGALEPAISGEIMRLHHQKHHATYVGNYNKALEQLDAAVAKGDASAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 229
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM3_MAIZE (Superoxide dismutase [Mn] 3.3, mitochondrial OS=Zea mays GN=SODA.2 PE=2 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 4.098e-92 Identity = 160/229 (69.87%), Postives = 183/229 (79.91%), Query Frame = 1 Query: 70 MALRSLATRKAI-----GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 741 MALR+LA++ A+ G + RG+ TV LPDL YD+ ALEP ISGEIM+LHHQK+H YV NYNKA+EQ+ + K D S VVQLQGAIKFNGGGHVNHSIFWKNL P+ EGGGEPPH LGWAID FG EAL+++M+AEGAALQGSGWVWL LD E K++ VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 1 MALRTLASKNALSFALGGAARPSAESARGVTTVALPDLSYDFGALEPVISGEIMRLHHQKNHATYVVNYNKALEQIDDVVVKGDDSAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 229
BLAST of CB610989 vs. ExPASy Swiss-Prot
Match: SODM_PEA (Superoxide dismutase [Mn], mitochondrial OS=Pisum sativum GN=SODA PE=2 SV=2) HSP 1 Score: 333.954 bits (855), Expect = 5.917e-91 Identity = 167/238 (70.17%), Postives = 187/238 (78.57%), Query Frame = 1 Query: 70 MALRSLATRKAIGL-----GKSVGLGL-------RGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDTHFGFLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 747 MA R+L RK + K +G + RGL TLPDL YDY ALEP ISGEIMQ+HHQKHHQ Y+TNYNKA+EQL A+ K DTST V+LQ AIKFNGGGH+NHSIFWKNLAPV EGGGEPP SLGWAIDT+FG LEALIQK++AEGAALQ WLGLD + KRLVVETT QDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYLKNIW V+NWK+AS+VY+KE Sbjct: 1 MAARTLLCRKTLSSVLRNDAKPIGAAIAAASTQSRGLHVFTLPDLAYDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLHDAVAKADTSTTVKLQNAIKFNGGGHINHSIFWKNLAPVSEGGGEPPKESLGWAIDTNFGSLEALIQKINAEGAALQ-----WLGLDKDLKRLVVETT--QDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKHASEVYEKE 231 The following BLAST results are available for this feature:
BLAST of CB610989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 224
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Sequences
The
following sequences are available for this feature:
EST sequence >CB610989 ID=CB610989; Name=CB610989; organism=Citrus sinensis; type=EST; length=789bpback to top |