CF417310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_DROME (60S acidic ribosomal protein P2 OS=Drosophila melanogaster GN=RpLP2 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 5.123e-22 Identity = 50/69 (72.46%), Postives = 61/69 (88.41%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVAAYLLAVLGG +P+++D+EKILSSVG+E DAE+L KVI EL GK++++LI GREKLSSMPVGG Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_BRAFL (60S acidic ribosomal protein P2 OS=Branchiostoma floridae PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.141e-21 Identity = 50/69 (72.46%), Postives = 61/69 (88.41%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVAAYLLAVLGGNA PS+ D++KIL SVGI+A+ E+L KVI ELKGK++EE++A+GR KLSSMP GG Sbjct: 1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKLSSMPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_ARTSA (60S acidic ribosomal protein P2 OS=Artemia salina PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.671e-20 Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVAAYLLA L GNA PS+AD+EKILSSVGIE + +L+KV++ELKGK++E LIA G+ KL+SMP GG Sbjct: 1 MRYVAAYLLAALSGNADPSTADIEKILSSVGIECNPSQLQKVMNELKGKDLEALIAEGQTKLASMPTGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_RAT (60S acidic ribosomal protein P2 OS=Rattus norvegicus GN=Rplp2 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 4.795e-20 Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVA+YLLA LGGN+ PS+ D++KIL SVGIEAD E+L KVISEL GKN+E++IA G KL+S+P GG Sbjct: 1 MRYVASYLLAALGGNSNPSAKDIKKILDSVGIEADDERLNKVISELNGKNIEDVIAQGVGKLASVPAGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_MOUSE (60S acidic ribosomal protein P2 OS=Mus musculus GN=Rplp2 PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 4.795e-20 Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVA+YLLA LGGN++PS+ D++KIL SVGIEAD ++L KVISEL GKN+E++IA G KL+S+P GG Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVGKLASVPAGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_HUMAN (60S acidic ribosomal protein P2 OS=Homo sapiens GN=RPLP2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.795e-20 Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVA+YLLA LGGN++PS+ D++KIL SVGIEAD ++L KVISEL GKN+E++IA G KL+S+P GG Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_BOVIN (60S acidic ribosomal protein P2 OS=Bos taurus GN=RPLP2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVA+YLLA LGGN++PS+ D++KIL SVGIEAD ++L KVISEL GKN+E++IA G KL+S+P GG Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELHGKNIEDVIAQGIGKLASVPAGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_HORSE (60S acidic ribosomal protein P2 OS=Equus caballus GN=RPLP2 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 8.179e-20 Identity = 46/69 (66.67%), Postives = 58/69 (84.06%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVA+YLLA LGGN +PS+ D++KIL SVGIEAD ++L KVISEL GKN+E++IA G KL+S+P GG Sbjct: 1 MRYVASYLLAALGGNTSPSAKDIKKILDSVGIEADDDRLDKVISELNGKNIEDVIAQGIGKLASVPAGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_PIG (60S acidic ribosomal protein P2 OS=Sus scrofa GN=RPLP2 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.108e-19 Identity = 45/69 (65.22%), Postives = 57/69 (82.61%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVA+YLLA LGGN +PS+ D++K L SVGIEAD ++L KVISEL GKN+E++IA G KL+S+P GG Sbjct: 1 MRYVASYLLAALGGNTSPSAKDIKKXLDSVGIEADXDRLNKVISELNGKNIEDVIAQGIGKLASVPSGG 69
BLAST of CF417310 vs. ExPASy Swiss-Prot
Match: RLA2_CRYST (60S acidic ribosomal protein P2 OS=Cryptochiton stelleri PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.302e-19 Identity = 44/69 (63.77%), Postives = 58/69 (84.06%), Query Frame = 2 Query: 8 MRYVAAYLLAVLGGNAAPSSADVEKILSSVGIEADAEKLKKVISELKGKNVEELIASGREKLSSMPVGG 214 MRYVAAY+LA LGGN PS +D++KIL SVGIE + ++L KVI+ELKGKN++E+IA G +KL+S+P GG Sbjct: 1 MRYVAAYMLATLGGNEKPSESDLKKILDSVGIEVEKDQLTKVINELKGKNLDEVIAEGEKKLASVPSGG 69 The following BLAST results are available for this feature:
BLAST of CF417310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417310 ID=CF417310; Name=CF417310; organism=Citrus sinensis; type=EST; length=450bpback to top |