CF417459
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA2_METCA (Glycogen synthase 2 OS=Methylococcus capsulatus GN=glgA2 PE=3 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 5.178e-49 Identity = 96/201 (47.76%), Postives = 129/201 (64.18%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLN-RPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 PDIIHCHDWQTA V +++Y P G+ RVCFT HNF++QG A+ L + GLD + DR++DN IN +KG IV++N VTTVSP YA E + G GL TL+ H K+ G++NGID D WNP D + V +N + ++GK +K+++R L L AD KP+V + RL PQKG+ LIRHA++ TLG G Sbjct: 127 PDIIHCHDWQTALVPVYLYEIYQPMGMRHPRVCFTIHNFKHQGVTGAQVLHASGLDRPEYYFHYDRLRDNHNPHAINLMKGGIVYANFVTTVSPRYAMEAKDQGQGFGLEPTLHIHHMKYGGVVNGIDYDVWNPEIDPHIPVHFNVDTIEGKYADKKALRDRLLL--ADNEKPIVSFVGRLDPQKGIELIRHALFYTLGQG 325 HSP 2 Score: 22.7126 bits (47), Expect = 5.178e-49 Identity = 11/23 (47.83%), Postives = 13/23 (56.52%), Query Frame = 2 Query: 611 FILLGSSPVPHIQREFEGIANHF 679 F+LLGSSP I F G+ F Sbjct: 328 FVLLGSSPDGAINGYFWGLKRQF 350
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_PARUW (Glycogen synthase OS=Protochlamydia amoebophila (strain UWE25) GN=glgA PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.308e-48 Identity = 94/201 (46.77%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRK--------HLGLSSADARKPLVGCITRLVPQKGVHLIRHAI 581 PDIIH HDWQTA +APLY D+Y G ++ FT HN EYQG A +L GLD + + MQDN IN LKG IV+S+ VTTVSP+YA+EV T + G+GL +TL + KF GILNGID WNP D FL Y+ ++ +++ ++ K L A+ +P++GCITRLVPQKG+ LI+H I Sbjct: 130 PDIIHLHDWQTAVIAPLYKDMYQKLGYTKPKILFTIHNMEYQGKCAAHDLNYIGLDGNRYQQHSFMQDNLYPHLINLLKGGIVYSDFVTTVSPNYAKEVLTPKEGRGLEATLVEYQHKFKGILNGIDYSYWNPEIDRFLPAHYSLREMPKNKKDRNTVDKKGFIKKILREKLYLAEEHRPIIGCITRLVPQKGIDLIKHTI 330 HSP 2 Score: 30.0314 bits (66), Expect = 3.308e-48 Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 2 Query: 581 ISNIGSWEDNFILLGSSPVPHIQREFEGIANHF 679 I +I + FILLGSSP+P I EF + + + Sbjct: 330 IRHIVEKKGQFILLGSSPIPSINDEFHRLKHQY 362
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNJB (Glycogen synthase 1 OS=Synechococcus sp. GN=glgA1 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.002e-47 Identity = 98/198 (49.49%), Postives = 129/198 (65.15%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLN-RPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 PDIIHCHDWQT V L +++Y G+ + RVC+T HNF++QG + L + GL+ + DR++DN +N +KG IVFSN VTTVSP++A EV+ + G GL TL H KF G+LNGID D WNP D F+ V+Y A L+ KA+NK+++R L L D KP+V I RL QKGVHL+ HAIYR+L Sbjct: 130 PDIIHCHDWQTGLVPVLLFEIYKYHGMGNQRVCYTIHNFKHQGFGGPEILWATGLNREPYYFHYDRLRDNFNPFSLNFMKGGIVFSNFVTTVSPNHALEVQFGDYGYGLGHTLYLHRHKFRGVLNGIDYDIWNPEIDRFIPVRYTAQTLENKAKNKKALRDRLLLQDVD--KPIVAYIGRLDEQKGVHLVHHAIYRSL 325
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA1_NITOC (Glycogen synthase 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA1 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.425e-46 Identity = 93/200 (46.50%), Postives = 121/200 (60.50%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 P+IIHCHDWQT V L ++ Y G+ RVC+T HN +QG L GLD P+R+ D++ +N +KG IVFSN +TTVSP Y E+R ++ G GL TL+ HS+K GILNG+D WNP D ++ +YN L K ENK ++R L L D KP+VG I+RL PQKGV LIRHA++ L G Sbjct: 128 PEIIHCHDWQTGLVPVLLFEQYKYLGMTHPRVCYTLHNMRHQGVTGGHILQQVGLDPAAYMTPERLLDHTYPHGVNLMKGGIVFSNFITTVSPRYLDEIRYTDQGYGLQHTLHEHSQKLGGILNGVDYKVWNPDIDPYIAARYNLKTLDKKYENKTALRHRLWL--RDEYKPIVGVISRLDPQKGVELIRHALFYCLANG 325
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNJA (Glycogen synthase 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA1 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.548e-46 Identity = 96/198 (48.48%), Postives = 124/198 (62.63%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLN-RPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 PDIIHCHDWQT V L +++Y G+ + RVC+T HNF++QG + L + GL+ + DR++DN +N +KG IVFSN VTTVSP++A E R GL TL H KF G+LNGID D WNP D F+ Y A L+ KA+NK+++R L L D KP+V I RL QKGVHL+ HAIYR+L Sbjct: 130 PDIIHCHDWQTGLVPVLLFEIYKYHGMENQRVCYTIHNFKHQGFGGPEILWATGLNREPYYFHYDRLRDNFNPFALNFMKGGIVFSNFVTTVSPTHALEARFGNYNYGLGHTLYLHQHKFRGVLNGIDYDIWNPEIDRFIPFHYTAQTLENKAKNKKALRDQLWLQDVD--KPIVAYIGRLDEQKGVHLVHHAIYRSL 325
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA1_ANAVT (Glycogen synthase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgA1 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.287e-45 Identity = 93/201 (46.27%), Postives = 130/201 (64.68%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLN-RPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 PDIIHCHDWQT V + +++Y G+++ RVC+T HNF++QG K L + GL+ + + D++QD+ +N +KG IV+SN VTTVSP++A E + ++ G GL TL H KF GILNGID D WNP D ++ YN D + K NK+++R+ L L +AD KP++ I RL QKGVHL+ HAIY +L G Sbjct: 130 PDIIHCHDWQTGLVPVMLYEIYKYHGMDTQRVCYTIHNFKHQGIGGVKTLWATGLNREAYYFQNDKLQDDFNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGHTLYQHKDKFSGILNGIDYDFWNPEIDRYIPYNYNQEDFEQKLYNKKALRERLLLQAAD--KPIIAYIGRLDNQKGVHLVHHAIYHSLNKG 328
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA2_ANASP (Probable glycogen synthase 2 OS=Anabaena sp. (strain PCC 7120) GN=glgA2 PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.859e-44 Identity = 89/201 (44.28%), Postives = 130/201 (64.68%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLN-RPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 PDIIHCHDWQT + + +++Y G+++ RVC+T HNF++QG K L + GL+ + + D+++D+ +N +KG IV+SN VTTVSP++A E + ++ G GL TL H +KF G+LNGID D WNP D + Y+ +D + K NK+++R+ L L +AD KP++ I RL QKGVHL+ HAIY L G Sbjct: 130 PDIIHCHDWQTGLIPVMLYEIYKYHGMDTQRVCYTIHNFKHQGIGGVKTLWATGLNREAYYFQDDKLRDDHNPFALNYMKGGIVYSNAVTTVSPNHALEAQYTDVGCGLGHTLYLHKEKFSGVLNGIDYDFWNPEIDRHIPDNYSQDDFEQKLYNKKALRERLLLQAAD--KPIIAYIGRLDNQKGVHLVHHAIYHALNKG 328
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNY3 (Probable glycogen synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=glgA2 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.684e-43 Identity = 93/201 (46.27%), Postives = 124/201 (61.69%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRP-DRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLGAG 602 PDIIHCHDWQT V L +++Y G++ RVC+T HNF++QG A A L + GL+ DR+QDN + IN +KG IV+SN V TVSP +A E R S+ GL TL H +KF GILNG+D + WNP D L ++ KA+NK+++R+ L L D +KP++ I RL QKGVHL+ H+IY L G Sbjct: 130 PDIIHCHDWQTGLVPVLLYEIYRFHGMDHQRVCYTIHNFKHQGIAGANILHATGLNNDSYYFSYDRLQDNFNPNAINFMKGGIVYSNYVNTVSPHHAWEARFSDISCGLGHTLEIHQQKFGGILNGLDYEVWNPEIDPLLASNFSVKTFGDKAKNKQALRERL-LLETDDKKPMLCFIGRLDGQKGVHLVHHSIYYALSQG 329
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_CLONN (Glycogen synthase OS=Clostridium novyi (strain NT) GN=glgA PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.570e-33 Identity = 81/202 (40.10%), Postives = 119/202 (58.91%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYV--PKGLNSARVCFTCHNFEYQGTAPAK---ELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 PD++HC+DW TA P+ D Y PK LN+ + +T HN +YQG + EL G + D+ + +D I+ +K IV+++ +TTVSP+YA+E++T G+GL+ L SK GILNGIDTD NP+TD FL +Y+ N+L+ KA NKE +++ L L + P++G + RL QKG LI+ I L Sbjct: 127 PDVLHCNDWHTAMTIPMLRDQYFNNPK-LNNIKTVYTIHNLKYQGRFGKEILWELLGFG---DEYFSEDKFK---YYDSISFMKAGIVYADAITTVSPTYAEEIKTEYYGEGLNGLLQSRSKDLYGILNGIDTDVNNPSTDMFLFDKYDVNNLEAKARNKEKLQEMLHLPK-NRDIPMIGIVARLEEQKGFELIKEVIEELL 320
BLAST of CF417459 vs. ExPASy Swiss-Prot
Match: GLGA_ALKMQ (Glycogen synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glgA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32 Identity = 74/198 (37.37%), Postives = 115/198 (58.08%), Query Frame = 3 Query: 3 PDIIHCHDWQTAFVAPLYWDLYVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTL 593 PDIIHCHDWQTA ++ L Y G + + FT HN +YQG P + L QQ ++ H +N +KG + FS+ +TTVSP+YAQE++ G+GL L+ K+ G+ NGID +NP TD L +++ +L+ K +NK +++ L L + DA+ P++G +TRLV QKG+ L+ + + + + Sbjct: 126 PDIIHCHDWQTAMISYLLKTQYQHHGFYKNIKTVFTIHNLKYQGVFPQEVLGDLFNGSQQHFNEGGVE---YHGNVNYMKGGLNFSDYITTVSPTYAQEIQDPFFGEGLEGVLSRKKKQLQGVTNGIDDSVYNPQTDIHLFKNFSSENLRNKKDNKLGLQERLNL-AVDAKIPMIGMVTRLVEQKGLDLVANQLEKLM 319 The following BLAST results are available for this feature:
BLAST of CF417459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417459 ID=CF417459; Name=CF417459; organism=Citrus sinensis; type=EST; length=679bpback to top |