CF417470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB2_TOBAC (Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1) HSP 1 Score: 369.777 bits (948), Expect = 6.458e-102 Identity = 182/209 (87.08%), Postives = 198/209 (94.74%), Query Frame = 1 Query: 1 VTRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 VTRSITKHNYLV+DV+DIPR+VREAF LA SGRPGPVLIDVPKDIQQQL +P+W+QP++LPGYMSRLPK P+E+ LEQIVRLISESKKPVLYVGGGC SSEELR+FVELTGIPVASTLMGLG+FP DELSL MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVS+CAD+KLAL+G+ Sbjct: 208 VTRSITKHNYLVMDVEDIPRVVREAFFLARSGRPGPVLIDVPKDIQQQLVIPDWDQPMRLPGYMSRLPKLPNEMLLEQIVRLISESKKPVLYVGGGCSQSSEELRRFVELTGIPVASTLMGLGAFPTGDELSLSMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICADIKLALQGL 416
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB1_TOBAC (Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 1.879e-101 Identity = 180/209 (86.12%), Postives = 198/209 (94.74%), Query Frame = 1 Query: 1 VTRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 VTRSITKHNYLV+DV+DIPR+VREAF LA SGRPGP+LIDVPKDIQQQL +P+W+QP++LPGYMSRLPK P+E+ LEQIVRLISESKKPVLYVGGGC SSE+LR+FVELTGIPVASTLMGLG+FP DELSL MLGMHGTVYANYAVD SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVS+CAD+KLAL+G+ Sbjct: 211 VTRSITKHNYLVMDVEDIPRVVREAFFLARSGRPGPILIDVPKDIQQQLVIPDWDQPMRLPGYMSRLPKLPNEMLLEQIVRLISESKKPVLYVGGGCSQSSEDLRRFVELTGIPVASTLMGLGAFPTGDELSLSMLGMHGTVYANYAVDSSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSICADIKLALQGL 419
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB_ARATH (Acetolactate synthase, chloroplastic OS=Arabidopsis thaliana GN=CSR 1.2 PE=1 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 9.326e-101 Identity = 179/209 (85.65%), Postives = 195/209 (93.30%), Query Frame = 1 Query: 1 VTRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 VTRSITKHNYLV+DV+DIPRI+ EAF LATSGRPGPVL+DVPKDIQQQLA+PNW Q ++LPGYMSR+PK P + HLEQIVRLISESKKPVLYVGGGCLNSS+EL +FVELTGIPVASTLMGLGS+P DELSL MLGMHGTVYANYAV+ SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSVC D+KLAL+G+ Sbjct: 214 VTRSITKHNYLVMDVEDIPRIIEEAFFLATSGRPGPVLVDVPKDIQQQLAIPNWEQAMRLPGYMSRMPKPPEDSHLEQIVRLISESKKPVLYVGGGCLNSSDELGRFVELTGIPVASTLMGLGSYPCDDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGM 422
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB3_BRANA (Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 1.347e-99 Identity = 180/209 (86.12%), Postives = 195/209 (93.30%), Query Frame = 1 Query: 1 VTRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 VTRSITKHNYLV+DVDDIPRIV+EAF LATSGRPGPVL+DVPKDIQQQLA+PNW+QP++LPGYMSRLP+ P L QIVRLISESK+PVLYVGGG LNSSEEL +FVELTGIPVASTLMGLGS+P DELSLQMLGMHGTVYANYAV+ SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSVC D+KLAL+G+ Sbjct: 196 VTRSITKHNYLVMDVDDIPRIVQEAFFLATSGRPGPVLVDVPKDIQQQLAIPNWDQPMRLPGYMSRLPQPPEVSQLGQIVRLISESKRPVLYVGGGSLNSSEELGRFVELTGIPVASTLMGLGSYPCNDELSLQMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGM 404
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB1_BRANA (Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 1.347e-99 Identity = 180/209 (86.12%), Postives = 195/209 (93.30%), Query Frame = 1 Query: 1 VTRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 VTRSITKHNYLV+DVDDIPRIV+EAF LATSGRPGPVL+DVPKDIQQQLA+PNW+QP++LPGYMSRLP+ P L QIVRLISESK+PVLYVGGG LNSSEEL +FVELTGIPVASTLMGLGS+P DELSLQMLGMHGTVYANYAV+ SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNK PHVSVC D+KLAL+G+ Sbjct: 199 VTRSITKHNYLVMDVDDIPRIVQEAFFLATSGRPGPVLVDVPKDIQQQLAIPNWDQPMRLPGYMSRLPQPPEVSQLGQIVRLISESKRPVLYVGGGSLNSSEELGRFVELTGIPVASTLMGLGSYPCNDELSLQMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGM 407
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB2_BRANA (Acetolactate synthase 2, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 349.362 bits (895), Expect = 9.033e-96 Identity = 173/210 (82.38%), Postives = 191/210 (90.95%), Query Frame = 1 Query: 1 VTRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTD-ELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 VTR+ITKHNYLV++VDDIPRIVREAF LATS RPGPVLIDVPKD+QQQ A+PNW QP++LP YMS +PK P HLEQI+RL+SESK+PVLYVGGGCLNSSEELR+FVELTGIPVAST MGLGS+P D E SLQMLGMHGTVYANYAV+ SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDS EIGKNK PHVSVC D++LAL+G+ Sbjct: 190 VTRTITKHNYLVMEVDDIPRIVREAFFLATSVRPGPVLIDVPKDVQQQFAIPNWEQPMRLPLYMSTMPKPPKVSHLEQILRLVSESKRPVLYVGGGCLNSSEELRRFVELTGIPVASTFMGLGSYPCDDEEFSLQMLGMHGTVYANYAVEYSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSTEIGKNKTPHVSVCCDVQLALQGM 399
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB1_MAIZE (Acetolactate synthase 1, chloroplastic OS=Zea mays GN=ALS1 PE=3 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 1.304e-94 Identity = 164/209 (78.47%), Postives = 192/209 (91.87%), Query Frame = 1 Query: 1 VTRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 VTRSITKHNYLVLDVDDIPR+V+EAF LA+SGRPGPVL+D+PKDIQQQ+AVP W++P+ LPGY++RLPK P+ LEQ++RL+ ES++PVLYVGGGC S EELR+FVELTGIPV +TLMGLG+FP D LSL+MLGMHGTVYANYAVDK+DLLLA GVRFDDRVTGK+EAFASRAKIVH+DID AEIGKNKQPHVS+CAD+KLAL+G+ Sbjct: 182 VTRSITKHNYLVLDVDDIPRVVQEAFFLASSGRPGPVLVDIPKDIQQQMAVPVWDKPMSLPGYIARLPKPPATELLEQVLRLVGESRRPVLYVGGGCAASGEELRRFVELTGIPVTTTLMGLGNFPSDDPLSLRMLGMHGTVYANYAVDKADLLLALGVRFDDRVTGKIEAFASRAKIVHVDIDPAEIGKNKQPHVSICADVKLALQGM 390
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB2_MAIZE (Acetolactate synthase 2, chloroplastic OS=Zea mays GN=ALS2 PE=3 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 3.795e-94 Identity = 164/209 (78.47%), Postives = 190/209 (90.91%), Query Frame = 1 Query: 1 VTRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 VTRSITKHNYLVLDVDDIPR+V+EAF LA+SGRPGPVL+D+PKDIQQQ+AVP W+ P+ LPGY++RLPK P+ LEQ++RL+ ES++PVLYVGGGC S EEL +FVELTGIPV +TLMGLG+FP D LSL+MLGMHGTVYANYAVDK+DLLLAFGVRFDDRVTGK+EAFA RAKIVHIDID AEIGKNKQPHVS+CAD+KLAL+G+ Sbjct: 182 VTRSITKHNYLVLDVDDIPRVVQEAFFLASSGRPGPVLVDIPKDIQQQMAVPAWDTPMSLPGYIARLPKPPATEFLEQVLRLVGESRRPVLYVGGGCAASGEELCRFVELTGIPVTTTLMGLGNFPSDDPLSLRMLGMHGTVYANYAVDKADLLLAFGVRFDDRVTGKIEAFAGRAKIVHIDIDPAEIGKNKQPHVSICADVKLALQGM 390
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB1_ORYSJ (Acetolactate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS1 PE=2 SV=1) HSP 1 Score: 338.961 bits (868), Expect = 1.221e-92 Identity = 161/209 (77.03%), Postives = 190/209 (90.91%), Query Frame = 1 Query: 1 VTRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 VTRSITKHNYLVLDV+DIPR+++EAF LA+SGRPGPVL+D+PKDIQQQ+AVP W+ + LPGY++RLPK P+ LEQ++RL+ ES++P+LYVGGGC S +ELR FVELTGIPV +TLMGLG+FP D LSL+MLGMHGTVYANYAVDK+DLLLAFGVRFDDRVTGK+EAFASRAKIVHIDID AEIGKNKQPHVS+CAD+KLAL+G+ Sbjct: 188 VTRSITKHNYLVLDVEDIPRVIQEAFFLASSGRPGPVLVDIPKDIQQQMAVPVWDTSMNLPGYIARLPKPPATELLEQVLRLVGESRRPILYVGGGCSASGDELRWFVELTGIPVTTTLMGLGNFPSDDPLSLRMLGMHGTVYANYAVDKADLLLAFGVRFDDRVTGKIEAFASRAKIVHIDIDPAEIGKNKQPHVSICADVKLALQGL 396
BLAST of CF417470 vs. ExPASy Swiss-Prot
Match: ILVB2_ORYSJ (Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 PE=2 SV=2) HSP 1 Score: 332.028 bits (850), Expect = 1.492e-90 Identity = 152/208 (73.08%), Postives = 189/208 (90.87%), Query Frame = 1 Query: 4 TRSITKHNYLVLDVDDIPRIVREAFLLATSGRPGPVLIDVPKDIQQQLAVPNWNQPIKLPGYMSRLPKEPSEIHLEQIVRLISESKKPVLYVGGGCLNSSEELRKFVELTGIPVASTLMGLGSFPGTDELSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKGI 627 TRSITKHNYL+LDVDDIPR++ EAF LA++GRPGPVL+D+PKDIQQQ+AVP+W+ P++LPGY+SRLPK P+ L++++RL+ ++++PVLYVGGGC S ELR+FVELTGIPV +TLMG+G+FP D LSL+MLGMHGTVYANYAVD +DLLLA GVRFDDRVTGK+EAFASRAKIVH+DID +E+GKNKQPHVS+CAD+KLAL+G+ Sbjct: 203 TRSITKHNYLILDVDDIPRVINEAFFLASTGRPGPVLVDIPKDIQQQMAVPSWDAPMRLPGYISRLPKPPAANLLDEVIRLVGDAERPVLYVGGGCSASGYELRRFVELTGIPVTTTLMGIGNFPSDDPLSLRMLGMHGTVYANYAVDNADLLLALGVRFDDRVTGKVEAFASRAKIVHVDIDPSELGKNKQPHVSICADVKLALQGM 410 The following BLAST results are available for this feature:
BLAST of CF417470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417470 ID=CF417470; Name=CF417470; organism=Citrus sinensis; type=EST; length=629bpback to top |