CF417474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417474 vs. ExPASy Swiss-Prot
Match: RH7_ARATH (DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana GN=RH7 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 4.482e-28 Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 3 Query: 399 ESEHPNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNGP 614 E ++PNAVS+FRIS PLREKLK+ GIE+LFPIQA TFDMVLDG+DLVGRARTGQGKTLAFVLPILESL NGP Sbjct: 91 EVDNPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGP 162
BLAST of CF417474 vs. ExPASy Swiss-Prot
Match: RH7_ORYSJ (DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica GN=Os09g0520700 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.302e-24 Identity = 56/67 (83.58%), Postives = 61/67 (91.04%), Query Frame = 3 Query: 411 PNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNG 611 PNA++ FRIS LREKLKSKGI++LFPIQA TFD+VLDG DLVGRARTGQGKTLAFVLPILESL NG Sbjct: 114 PNALANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNG 180
BLAST of CF417474 vs. ExPASy Swiss-Prot
Match: RH7_SPIOL (DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea GN=RH7 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.143e-23 Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 3 Query: 399 ESEHPNAVSRFRISVPLREKLKSKGIESLFPIQAMTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLTNG 611 E+E PN++S FRIS PL++ L SKGI++LFPIQAMTFD V+DG DLVGRARTGQGKTLAFVLPI+ESL NG Sbjct: 102 EAEDPNSLSNFRISKPLKDVLISKGIKALFPIQAMTFDNVIDGCDLVGRARTGQGKTLAFVLPIVESLVNG 172 The following BLAST results are available for this feature:
BLAST of CF417474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417474 ID=CF417474; Name=CF417474; organism=Citrus sinensis; type=EST; length=616bpback to top |