CF417589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417589 vs. ExPASy Swiss-Prot
Match: KATAM_ORYSJ (Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 9.616e-52 Identity = 109/220 (49.55%), Postives = 141/220 (64.09%), Query Frame = 1 Query: 1 DFGANTLLNLPRVQNVSVLTVERNPWRGSNQHGIPYPSYFHPSTSSQMLTWQQKMRLSKRPNLFTFIGAPRKGLEKAAIRDELIKQCGQSTRCKLLTCSNRSGASNKCYSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSQHTAYTQYAWYLPQDAEEYSVYINGEEGNNARRKRIEDELMKIPTKRVEXMRNKVIDLIPRVTYKHPNA 660 D+G N LL +P +N+S+L VE +PW +N IPYP+YFHP+ + +L WQ +MR +RP LF+F GAPR K+ IR +LI QC S+ CKLL C +KC+SPS I+ + S FCLQ GDS+TRRS FDS+LAGCIPVFF +AY QY W+LP++ YSV+I E+G IED L I V+ MR +VI LIPRV Y P + Sbjct: 283 DWG-NKLLFMPAAKNMSMLVVESSPWN-ANDFAIPYPTYFHPAKDADVLLWQDRMRSLERPWLFSFAGAPRPDDPKS-IRSQLIDQCRTSSVCKLLECDL---GESKCHSPSAIMNMFQNSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYVQYTWHLPKNYTRYSVFI-PEDGVRKGNVSIEDRLKSIHPDMVKKMREEVISLIPRVIYADPRS 495
BLAST of CF417589 vs. ExPASy Swiss-Prot
Match: KATAM_ARATH (Xyloglucan galactosyltransferase KATAMARI1 OS=Arabidopsis thaliana GN=KAM1 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 9.616e-52 Identity = 108/220 (49.09%), Postives = 145/220 (65.91%), Query Frame = 1 Query: 1 DFGANTLLNLPRVQNVSVLTVERNPWRGSNQHGIPYPSYFHPSTSSQMLTWQQKMRLSKRPNLFTFIGAPRKGLEKAAIRDELIKQCGQSTRCKLLTCSNRSGASNKCYSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSQHTAYTQYAWYLPQDAEEYSVYINGEEGNNARRKRIEDELMKIPTKRVEXMRNKVIDLIPRVTYKHPNA 660 D+G N LL LP +N+S+L VE +PW +N GIPYP+YFHP+ S++ WQ +MR +R LF+F GAPR K+ IR ++I QC S KLL C +KC++PS I+ + S FCLQ GDS+TRRS FDS+LAGCIPVFF +AYTQY W+LP++ YSV+I E+ R IE+ L++IP K+V+ MR VI+LIPR+ Y P + Sbjct: 306 DWG-NKLLFLPAAKNMSMLVVESSPWN-ANDFGIPYPTYFHPAKDSEVFEWQDRMRNLERKWLFSFAGAPRPDNPKS-IRGQIIDQCRNSNVGKLLECDF---GESKCHAPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTTYSVFI-PEDDVRKRNISIEERLLQIPAKQVKIMRENVINLIPRLIYADPRS 518 The following BLAST results are available for this feature:
BLAST of CF417589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417589 ID=CF417589; Name=CF417589; organism=Citrus sinensis; type=EST; length=692bpback to top |