CF417601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.214e-28 Identity = 56/75 (74.67%), Postives = 67/75 (89.33%), Query Frame = 3 Query: 3 QYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 227 Q+GSHG GR+ L+ES+L DLL GSE+V+TYEDKD DWMLVGDVPWEMFI +CK+LRIMKS++AIGLAPR +EKC Sbjct: 227 QFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKC 301
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.483e-28 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 3 Query: 3 QYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 Q G HGA GRE +SE KLKDLLHGSEFVLTYEDKDGDWMLVGDVPWE+F TC++L+IMK +D+IGLAP AVEK Sbjct: 241 QCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEK 314
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.034e-26 Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 3 Query: 3 QYGSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGL--APRAVEK 224 Q GS+GA G++MLSE+KLKDLL+G ++VLTYEDKDGDWMLVGDVPWEMFI CK+L+IMK DAIGL APRA+EK Sbjct: 258 QCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEK 333
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.493e-25 Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 3 Query: 9 GSHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 227 GSHG G ++ESK+ DLL+GSE+V TYEDKDGDWMLVGDVPWEMF+ +CKRLRIMK ++AIGLAPRA+EKC Sbjct: 204 GSHGVNG---MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKC 273
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25 Identity = 51/74 (68.92%), Postives = 66/74 (89.19%), Query Frame = 3 Query: 9 GSHGALG-REMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 227 G++G G ++ ++ESKL DLL+GS++V TYEDKDGDWMLVGDVPWEMF+ +CKR+RIMK ++AIGLAPRA+EKC Sbjct: 159 GNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKC 232
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.058e-23 Identity = 49/73 (67.12%), Postives = 64/73 (87.67%), Query Frame = 3 Query: 9 GSHGALGR-EMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 G++GA G + ++ESKL +LL+ SE+V +YEDKDGDWMLVGDVPWEMF+ +CKRLRIMK ++A+GLAPRA+EK Sbjct: 165 GNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEK 237
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 9.058e-23 Identity = 50/73 (68.49%), Postives = 63/73 (86.30%), Query Frame = 3 Query: 9 GSHGALGR-EMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 GS+GA G + ++ESK+ DLL+ SE+V +YEDKDGDWMLVGDVPW MF+ +CKRLRIMK ++AIGLAPRA+EK Sbjct: 151 GSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEK 223
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21 Identity = 47/71 (66.20%), Postives = 58/71 (81.69%), Query Frame = 3 Query: 12 SHGALGREMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEK 224 S+G GR+ LS+ +L DL +G+E VLTYEDKD DWMLVGDVPW MF +C+RLRIMK +DA+GLAPRA +K Sbjct: 191 SNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDK 261
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.708e-21 Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 3 Query: 9 GSHGALGRE----MLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAIGLAPRAVEKC 227 G HG G E ++E KL DL++ ++V +YEDKDGDWMLVGDVPW MF+ TCKRLR+MK +DAIGLAPRA+EKC Sbjct: 151 GKHG--GEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKC 225
BLAST of CF417601 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 3 Query: 30 REMLSESKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEMFIGTCKRLRIMKSTDAI--GLAPRAVEKC 227 ++ ++ESKL DLL+ S++V TYEDKDGDWMLVGDVPWEMF+ +CKRLRIMK +AI GLAPRA+ KC Sbjct: 172 KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKC 239 The following BLAST results are available for this feature:
BLAST of CF417601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417601 ID=CF417601; Name=CF417601; organism=Citrus sinensis; type=EST; length=681bpback to top |