CF417696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417696 vs. ExPASy Swiss-Prot
Match: P2R3C_MOUSE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Mus musculus GN=Ppp2r3c PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26 Identity = 79/231 (34.20%), Postives = 115/231 (49.78%), Query Frame = 2 Query: 2 EEGSISHRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPSLAQLRDMPTGFIQMYCRIAAHKFFFFCDPHRRGKACIKKVLLSNCXXXXXXXXXXXXXXVTDTEQAENWFSLTSAQRVCDMFIALDKD 688 E+ + +++ ++ FL+++S +W L ++ I G E M NYE+F + E+ GPKC++FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+L QL + F Y A KFFFF DP R GK I+ +L + ++ Q NWFS SA RV ++ LDKD Sbjct: 66 EDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QIPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACS---FLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKD 288
BLAST of CF417696 vs. ExPASy Swiss-Prot
Match: P2R3C_RAT (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Rattus norvegicus GN=Ppp2r3c PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26 Identity = 78/231 (33.77%), Postives = 115/231 (49.78%), Query Frame = 2 Query: 2 EEGSISHRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPSLAQLRDMPTGFIQMYCRIAAHKFFFFCDPHRRGKACIKKVLLSNCXXXXXXXXXXXXXXVTDTEQAENWFSLTSAQRVCDMFIALDKD 688 E+ + +++ ++ FL+++S +W L ++ I G E M NYE+F + E+ GPKC++FF+ F K D GR++I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+L QL + F Y A KFFFF DP R GK I+ +L + ++ Q NWFS SA RV ++ LDKD Sbjct: 66 EDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QIPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRVSIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACS---FLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKD 288
BLAST of CF417696 vs. ExPASy Swiss-Prot
Match: P2R3C_BOVIN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Bos taurus GN=PPP2R3C PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25 Identity = 75/230 (32.61%), Postives = 112/230 (48.70%), Query Frame = 2 Query: 2 EEGSISHRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPSLAQLRDMPTGFIQMYCRIAAHKFFFFCDPHRRGKACIKKVLLSNCXXXXXXXXXXXXXXVTDTEQAENWFSLTSAQRVCDMFIALDKD 688 E+ + +++ ++ FL+++S +W L ++ +NYE+F + E+ GPKC++FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+L QL + F Y A KFFFF DP R GK I+ +L + ++ Q NWFS SA RV ++ LDKD Sbjct: 66 EDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACS---FLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKD 288
BLAST of CF417696 vs. ExPASy Swiss-Prot
Match: P2R3C_HUMAN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Homo sapiens GN=PPP2R3C PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24 Identity = 74/230 (32.17%), Postives = 111/230 (48.26%), Query Frame = 2 Query: 2 EEGSISHRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPSLAQLRDMPTGFIQMYCRIAAHKFFFFCDPHRRGKACIKKVLLSNCXXXXXXXXXXXXXXVTDTEQAENWFSLTSAQRVCDMFIALDKD 688 E+ + +++ ++ FL+++S +W L ++ +NYE+F + E+ G KC++FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+L QL + F Y A KFFFF DP R GK I+ +L + ++ Q NWFS SA RV ++ LDKD Sbjct: 66 EDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVG----EKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACS---FLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKD 288
BLAST of CF417696 vs. ExPASy Swiss-Prot
Match: P2R3C_DANRE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Danio rerio GN=ppp2r3c PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 76/231 (32.90%), Postives = 112/231 (48.48%), Query Frame = 2 Query: 2 EEGSISHRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPSLAQLRDMPTGFIQMYCRIAAHKFFFFCDPHRRGKACIKKVLLSNCXXXXXXXXXXXXXXVTDTEQAENWFSLTSAQRVCDMFIALDKD 688 E+ + +++ ++ FL+++S +W L ++ V TG E M +YE F + E+ G KC+ FF+ + K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+L QL + F Y A KFFFF DP GK I+ +L + ++ Q NWFS SA RV ++ LDKD Sbjct: 69 EDEVLMQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQV-PPTTGDEAMISYESFLKVG----EKAGTKCKLFFTARVYAKLLHNDPYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLHTGKIKIQDILACS---FLDDLLELRDEELSKESQESNWFSAPSALRVYGQYLNLDKD 291
BLAST of CF417696 vs. ExPASy Swiss-Prot
Match: P2R3C_XENTR (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Xenopus tropicalis GN=ppp2r3c PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23 Identity = 76/231 (32.90%), Postives = 111/231 (48.05%), Query Frame = 2 Query: 2 EEGSISHRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPSLAQLRDMPTGFIQMYCRIAAHKFFFFCDPHRRGKACIKKVLLSNCXXXXXXXXXXXXXXVTDTEQAENWFSLTSAQRVCDMFIALDKD 688 E+ + +++ ++ FL+++S +W L ++ G E M NY +F + E+ G KC+ FF+ F K D GRI+I+ F+ YVMR V L Q RI +S D G+L+ ++E YI LIP+L QL + F Y A KFFFF DP R GK I+ +L + ++ Q NWFS SA RV ++ LDKD Sbjct: 61 EDEVLQQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QSPPLIGEEAMINYTNFQTVG----EKAGEKCKTFFTSKVFSKLIPNDPYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACS---FLDDLLELRDEDLSKESQESNWFSAPSALRVYGQYLNLDKD 283 The following BLAST results are available for this feature:
BLAST of CF417696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417696 ID=CF417696; Name=CF417696; organism=Citrus sinensis; type=EST; length=693bpback to top |