CF417827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417827 vs. ExPASy Swiss-Prot
Match: Y4466_ARATH (ZF-HD homeobox protein At4g24660 OS=Arabidopsis thaliana GN=At4g24660 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.675e-39 Identity = 45/79 (56.96%), Postives = 55/79 (69.62%), Query Frame = 2 Query: 404 RPPRREEVNLNVCPPGNVGPATGKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVWMHN 640 RPP + P + G G +KR RTKFT EQK+KML FAER+GWR+Q+ DDVA+ QFC E GV+R VLK+WMHN Sbjct: 136 RPPAASGDEEDTSNPSSSG---GTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHN 211 HSP 2 Score: 86.6557 bits (213), Expect = 5.675e-39 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 1 Query: 154 INYKECMKNHAASIGGHANDGCCEFMPRAD----DSLTCAACGCHRNFHRRE 297 I Y+EC+KNHA +IGGHA DGCCEFMP + D+L CAACGCHRNFHR+E Sbjct: 47 IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKE 98
BLAST of CF417827 vs. ExPASy Swiss-Prot
Match: Y5541_ARATH (ZF-HD homeobox protein At5g65410 OS=Arabidopsis thaliana GN=At5g65410 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.104e-17 Identity = 41/78 (52.56%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 407 PPRREEVNLNVCPPGNVGPATGKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVWMHN 640 PP + E + + + G KR RTKFT EQK++ML AERIGWR+QRQDD + +FC E GV R VLKVW+HN Sbjct: 168 PPPQRERSEDPMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGVPRQVLKVWLHN 245 HSP 2 Score: 74.3294 bits (181), Expect = 5.898e-13 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 160 YKECMKNHAASIGGHANDGCCEFMPR----ADDSLTCAACGCHRNFHRREV 300 ++EC+KN A +IGGHA DGC EFMP D+L CAACGCHRNFHR+E+ Sbjct: 75 FRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKEL 125 The following BLAST results are available for this feature:
BLAST of CF417827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417827 ID=CF417827; Name=CF417827; organism=Citrus sinensis; type=EST; length=642bpback to top |