CF417847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: TRXX_ARATH (Thioredoxin-X, chloroplastic OS=Arabidopsis thaliana GN=ATHX PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 9.274e-45 Identity = 103/191 (53.93%), Postives = 130/191 (68.06%), Query Frame = 2 Query: 104 SXFSNSTLLFKQQPLVAPVRTVT-VTHRQQNIITSAXXXXXXPSKNQLLFGSRTNLSLKSYNXTLPRLAIRVRCGASSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLLDSISVA 673 S S+ST+L + L PVR+ + T ++S +++ L S + KS + +RCG GI EI ESEF +TVL+S +PVLVEFVA WCGPC+L+ PA+E L+QEYGD+LT+VKIDHDANP+LI E+KVYGLP ILFK+G+EVP SRREGAITK LKEYID LL+SISVA Sbjct: 3 SIVSSSTILMRSY-LTPPVRSCSPATSVSVKPLSSVQVTSVAANRHLLSLSSGARRTRKSSSSV-------IRCG---GIKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLLNSISVA 182
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO2_ANASP (Thioredoxin-2 OS=Anabaena sp. (strain PCC 7120) GN=trxB PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21 Identity = 52/111 (46.85%), Postives = 78/111 (70.27%), Query Frame = 2 Query: 329 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLLDS 661 S G+ IT++EF + VLK+E+PVLV F A+WCGPC+L++P + A Y DRL VVK++ D NP +++YKV G+P L L K G+++ +S EG I+K L ++DT L++ Sbjct: 2 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLVK-GEQILDS-TEGVISKDKLLSFLDTHLNN 110
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_THIFE (Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21 Identity = 48/109 (44.04%), Postives = 71/109 (65.14%), Query Frame = 2 Query: 329 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLL 655 S I +++ F VLKS +PVLV+F A WCGPC+++AP +E +A EY DRL V K + D NP +Y + G+PTL+LFK G+ E+ + GA++K L ++D+ L Sbjct: 2 SDAILYVSDDSFETDVLKSSKPVLVDFWAEWCGPCKMIAPILEEIADEYADRLRVAKFNIDENPNTPPQYAIRGIPTLLLFKAGK--LEATKVGALSKAQLTAFLDSQL 108
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO2_SYNY3 (Thioredoxin-like protein slr1139 OS=Synechocystis sp. (strain PCC 6803) GN=slr1139 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20 Identity = 51/109 (46.79%), Postives = 71/109 (65.14%), Query Frame = 2 Query: 338 ITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLLDSI 664 + EIT++EF +PVLV F A+WCGPCRL+APA++ +A++YGD+L V+K++ D NP + + KV G+P L LFKN + V EGAI K L E + LD I Sbjct: 3 LLEITDAEFEQETQGQTKPVLVYFWASWCGPCRLMAPAIQAIAKDYGDKLKVLKLEVDPNPAAVAQCKVEGVPALRLFKNNELV--MTHEGAIAKPKLLELLKEELDFI 109
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_SHIFL (Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 329 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLL 655 S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++ D NP +Y + G+PTL+LFKNG+ + + GA++K LKE++D L Sbjct: 2 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 108
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_SALTY (Thioredoxin-1 OS=Salmonella typhimurium GN=trxA PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 329 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLL 655 S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++ D NP +Y + G+PTL+LFKNG+ + + GA++K LKE++D L Sbjct: 2 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 108
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_SALTI (Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 329 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLL 655 S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++ D NP +Y + G+PTL+LFKNG+ + + GA++K LKE++D L Sbjct: 2 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 108
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_ECOLI (Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 329 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLL 655 S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++ D NP +Y + G+PTL+LFKNG+ + + GA++K LKE++D L Sbjct: 2 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 108
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_ECOL6 (Thioredoxin-1 OS=Escherichia coli O6 GN=trxA PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 329 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLL 655 S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++ D NP +Y + G+PTL+LFKNG+ + + GA++K LKE++D L Sbjct: 2 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 108
BLAST of CF417847 vs. ExPASy Swiss-Prot
Match: THIO_ECO57 (Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 329 SSGITEITESEFPNTVLKSERPVLVEFVANWCGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKVYGLPTLILFKNGQEVPESRREGAITKLXLKEYIDTLL 655 S I +T+ F VLK++ +LV+F A WCGPC+++AP ++ +A EY +LTV K++ D NP +Y + G+PTL+LFKNG+ + + GA++K LKE++D L Sbjct: 2 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVA--ATKVGALSKGQLKEFLDANL 108 The following BLAST results are available for this feature:
BLAST of CF417847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417847 ID=CF417847; Name=CF417847; organism=Citrus sinensis; type=EST; length=720bpback to top |