CF503939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H32_ARATH (Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis thaliana GN=At2g47850 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.272e-43 Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 2 Query: 95 GDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G+RCRYNHPR+ TG YP+R GEP CQFYLKTGTCKFGASCKFHHPK++GGSMSHVPLNIYGYP+R G+ ECSYYLKTG Sbjct: 63 GNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLKTG 149 HSP 2 Score: 47.3654 bits (111), Expect = 1.272e-43 Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 1 Query: 22 NESYPQRHGVPDCVFYMRTGVCGY 93 ++SYP+R G PDC +YMRTGVCGY Sbjct: 39 SDSYPERPGAPDCAYYMRTGVCGY 62 HSP 3 Score: 85.1149 bits (209), Expect = 1.203e-16 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 2 Query: 167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 +P+RPGEP CQ+YLKTG CKFG SCKFHHP+ ++ L+ G PLRPG + C++Y++ G Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNG 348
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H58_ARATH (Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.761e-32 Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = 2 Query: 95 GDRCRYNHPRNXXXXXXXXXX-TGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGG--SMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G RCR+NHPRN G++P+R G+P+CQ +++TGTCKFGASCK+HHP+ GG S++ V LN G+PLRPGEKECSY+++TG Sbjct: 69 GSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTG 158 HSP 2 Score: 41.9726 bits (97), Expect = 1.761e-32 Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 1 Query: 25 ESYPQRHGVPDCVFYMRTGVCGY 93 E++P+R PDC++Y+RTGVCGY Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGY 68 HSP 3 Score: 68.5514 bits (166), Expect = 1.165e-11 Identity = 28/67 (41.79%), Postives = 43/67 (64.18%), Query Frame = 2 Query: 167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHS----GGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 +P RP +P CQ++++TG CKFG SC+FHHP + ++SH+ G PLRPG C+++ + G Sbjct: 297 FPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEASTLSHI-----GLPLRPGAVPCTHFAQHG 358
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H34_ARATH (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.890e-32 Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 2 Query: 95 GDRCRYNHPRNXXXXXXXXXX-TGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKH--SGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G RCR+NHPR+ G P+R G P+CQ +++TGTCKFGASCK+HHP+ GGS++ V L+ GYPLRPGEKECSYYL+TG Sbjct: 72 GSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTG 161 HSP 2 Score: 44.669 bits (104), Expect = 3.890e-32 Identity = 16/23 (69.57%), Postives = 20/23 (86.96%), Query Frame = 1 Query: 25 ESYPQRHGVPDCVFYMRTGVCGY 93 ESYP+R PDC++Y+RTGVCGY Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGY 71 HSP 3 Score: 72.4034 bits (176), Expect = 8.067e-13 Identity = 26/64 (40.62%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 164 DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 ++P RP +P CQ++++TG CKFG+SC++HHP + + + L+ G PLRPG +C+++ + G Sbjct: 303 EFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHG 366
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.899e-31 Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 2 Query: 95 GDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G CR+NHP++ G+YP+R G+P CQ+YLKTGTCKFG +CKFHHP+ G V LN GYPLRP EKEC+YYLKTG Sbjct: 98 GMSCRFNHPQDRNLAIASARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTG 184 HSP 2 Score: 37.3502 bits (85), Expect = 1.899e-31 Identity = 12/21 (57.14%), Postives = 17/21 (80.95%), Query Frame = 1 Query: 31 YPQRHGVPDCVFYMRTGVCGY 93 YP+R G PDC +Y+RTG+C + Sbjct: 77 YPERSGEPDCTYYLRTGLCRF 97 HSP 3 Score: 77.7962 bits (190), Expect = 1.920e-14 Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 +P+RP +P CQ+Y+KTG CKFGA CKFHHP+ L+ G PLRPGE+ C +Y + G Sbjct: 329 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYG 391 HSP 4 Score: 60.8474 bits (146), Expect = 7.879e-13 Identity = 27/61 (44.26%), Postives = 35/61 (57.38%), Query Frame = 2 Query: 80 GSVDTGDRCRYNHPRNXXXXXXXXXX-TGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPK 259 G+ G C+++HPR T YP RP E C +YLKTG CK+G +CKFHHP+ Sbjct: 138 GTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPE 198 HSP 5 Score: 33.4982 bits (75), Expect = 7.879e-13 Identity = 10/26 (38.46%), Postives = 18/26 (69.23%), Query Frame = 1 Query: 16 KVNESYPQRHGVPDCVFYMRTGVCGY 93 ++ YP+R G P+C +Y++TG C + Sbjct: 117 RMKGEYPERMGQPECQYYLKTGTCKF 142
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.471e-31 Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 2 Query: 95 GDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G C++NHP N G+YP R G+P CQ+YLKTGTCKFGA+CKFHHP+ + V LN+ GYP+RP EKEC+YYL+TG Sbjct: 84 GMTCKFNHPPNRKLAVAAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYYLRTG 170 HSP 2 Score: 39.2762 bits (90), Expect = 2.471e-31 Identity = 18/36 (50.00%), Postives = 22/36 (61.11%), Query Frame = 1 Query: 1 WQSDLKVNES-----YPQRHGVPDCVFYMRTGVCGY 93 WQ L ES YP+R G PDC +YMRTG+C + Sbjct: 48 WQMTLGGGESMESTPYPERIGEPDCSYYMRTGLCRF 83 HSP 3 Score: 83.1889 bits (204), Expect = 4.570e-16 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 2 Query: 167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 +P+RP +P CQFY+KTG CKFGA CKFHHPK + LN G PLRPGE C++Y + G Sbjct: 315 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYG 377 HSP 4 Score: 58.9214 bits (141), Expect = 1.724e-12 Identity = 26/63 (41.27%), Postives = 35/63 (55.56%), Query Frame = 2 Query: 80 GSVDTGDRCRYNHPRNXXXXXXXXXXTG-DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHS 265 G+ G C+++HPR YP RP E C +YL+TG CKF ++CKFHHP+ S Sbjct: 124 GTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHHPQPS 186 HSP 5 Score: 34.2686 bits (77), Expect = 1.724e-12 Identity = 11/26 (42.31%), Postives = 18/26 (69.23%), Query Frame = 1 Query: 16 KVNESYPQRHGVPDCVFYMRTGVCGY 93 ++N YP R G P+C +Y++TG C + Sbjct: 103 RMNGEYPYRVGQPECQYYLKTGTCKF 128
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.573e-30 Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 95 GDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G CR+NHP + G+YP+R G+P C+FYLKTGTCKFG +CKFHHP++ G V +N+ YPLRP E +CSY+L+ G Sbjct: 60 GSTCRFNHPHDRKLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIG 146 HSP 2 Score: 43.5134 bits (101), Expect = 1.573e-30 Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 1 Query: 1 WQSDLK------VNESYPQRHGVPDCVFYMRTGVCGY 93 WQ +L V+ SYP+RHG PDC +Y+RTG+C + Sbjct: 23 WQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRF 59 HSP 3 Score: 78.9518 bits (193), Expect = 8.619e-15 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 2 Query: 167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 +P+RPG+P CQFY+KTG CKFG CKFHHP+ L+ G PLRPGE C +Y + G Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYG 302 HSP 4 Score: 69.707 bits (169), Expect = 5.229e-12 Identity = 31/66 (46.97%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 161 GDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYG-YPLRPGEKECSYYLKTG 355 G YP+R GEP C +Y++TG C+FG++C+F+HP + I G YP R G+ EC +YLKTG Sbjct: 37 GSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDR--KLVIATARIKGEYPERIGQPECEFYLKTG 100 HSP 5 Score: 58.151 bits (139), Expect = 8.309e-12 Identity = 27/63 (42.86%), Postives = 36/63 (57.14%), Query Frame = 2 Query: 71 CELGSVDTGDRCRYNHPRNXXXXXXXXXXTG-DYPDRPGEPICQFYLKTGTCKFGASCKFHHP 256 C+ G+V C+++HPR+ + P RPGEP+C FY + G CKFG SCKF HP Sbjct: 258 CKFGTV-----CKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 315 HSP 6 Score: 55.8398 bits (133), Expect = 8.309e-12 Identity = 24/61 (39.34%), Postives = 34/61 (55.74%), Query Frame = 2 Query: 80 GSVDTGDRCRYNHPRNXXXXXXXXXXTG-DYPDRPGEPICQFYLKTGTCKFGASCKFHHPK 259 G+ G C+++HPRN YP RP E C ++L+ G CKFG +CKF+HP+ Sbjct: 100 GTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQ 160 HSP 7 Score: 35.039 bits (79), Expect = 8.309e-12 Identity = 11/26 (42.31%), Postives = 18/26 (69.23%), Query Frame = 1 Query: 16 KVNESYPQRHGVPDCVFYMRTGVCGY 93 ++ YP+R G P+C FY++TG C + Sbjct: 79 RIKGEYPERIGQPECEFYLKTGTCKF 104 HSP 8 Score: 32.7278 bits (73), Expect = 8.309e-12 Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 1 Query: 31 YPQRHGVPDCVFYMRTGVCGY 93 +P+R G P+C FYM+TG C + Sbjct: 240 FPERPGQPECQFYMKTGDCKF 260
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.665e-30 Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 2 Query: 95 GDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G CR+NHPR+ G+YP+R G+P C++YLKTGTCKFG +CKFHHP++ G V LN+ GYPLR E +C+Y+L+TG Sbjct: 58 GSTCRFNHPRDRELVIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTG 144 HSP 2 Score: 40.4318 bits (93), Expect = 2.665e-30 Identity = 17/36 (47.22%), Postives = 24/36 (66.67%), Query Frame = 1 Query: 1 WQSDLKVNE-----SYPQRHGVPDCVFYMRTGVCGY 93 WQ +L +E SYP+R G PDC +Y+RTG+C + Sbjct: 22 WQMNLSSDETMETGSYPERPGEPDCSYYIRTGLCRF 57 HSP 3 Score: 79.7221 bits (195), Expect = 5.053e-15 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 2 Query: 167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 +P+RPG+P CQFY+KTG CKFG CKFHHP+ L+ G PLRPGE C +Y + G Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYG 333 HSP 4 Score: 58.5362 bits (140), Expect = 6.388e-12 Identity = 27/63 (42.86%), Postives = 36/63 (57.14%), Query Frame = 2 Query: 71 CELGSVDTGDRCRYNHPRNXXXXXXXXXXTG-DYPDRPGEPICQFYLKTGTCKFGASCKFHHP 256 C+ G+V C+++HPR+ + P RPGEP+C FY + G CKFG SCKF HP Sbjct: 289 CKFGTV-----CKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHP 346 HSP 5 Score: 32.7278 bits (73), Expect = 6.388e-12 Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 1 Query: 31 YPQRHGVPDCVFYMRTGVCGY 93 +P+R G P+C FYM+TG C + Sbjct: 271 FPERPGQPECQFYMKTGDCKF 291
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: ZFNL_PEA (Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.468e-30 Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 95 GDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G CR+NHP N G++P+R G+P CQ+YLKTGTCKFGA+C+FHHPK G V LNI GYPLRP E E +YYL+TG Sbjct: 48 GATCRFNHPPNRKLAIATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYYLRTG 134 HSP 2 Score: 38.1206 bits (87), Expect = 3.468e-30 Identity = 15/36 (41.67%), Postives = 24/36 (66.67%), Query Frame = 1 Query: 1 WQSDLKVNES-----YPQRHGVPDCVFYMRTGVCGY 93 WQ +L+ +E+ YP+ G PDC +Y+RTG+C + Sbjct: 12 WQMNLRSSETMESGPYPEHPGEPDCSYYIRTGLCRF 47 HSP 3 Score: 76.2554 bits (186), Expect = 5.586e-14 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = 2 Query: 167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 +P+RP +P CQFY+KTG CKFGA C+FHHP+ L+ G PLRPGE C +Y + G Sbjct: 275 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYG 337 HSP 4 Score: 58.151 bits (139), Expect = 3.964e-11 Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 2 Query: 71 CELGSVDTGDRCRYNHPRNXXXXXXXXXXTG-DYPDRPGEPICQFYLKTGTCKFGASCKFHHP 256 C+ G+V CR++HPR + P RPGEP+C FY + G CKFG SCKF HP Sbjct: 293 CKFGAV-----CRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 350 HSP 5 Score: 30.4166 bits (67), Expect = 3.964e-11 Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 13 LKVNESYPQRHGVPDCVFYMRTGVCGY 93 L+ + +P+R P+C FYM+TG C + Sbjct: 269 LQRDNIFPERPDQPECQFYMKTGDCKF 295
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 4.511e-30 Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 95 GDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G C++NHP + G+YP R G+P CQ+YLKTGTCKFGA+CKFHHP+ + V LN GYPLRP EKEC+YYL+TG Sbjct: 74 GMTCKFNHPADRKMAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKECAYYLRTG 160 HSP 2 Score: 36.965 bits (84), Expect = 4.511e-30 Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 1 Query: 31 YPQRHGVPDCVFYMRTGVCGY 93 YP+R G PDC +YMRTG+C + Sbjct: 53 YPERIGEPDCSYYMRTGLCRF 73 HSP 3 Score: 80.4925 bits (197), Expect = 2.962e-15 Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 2 Query: 167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 +P+RP +P CQFY+KTG CKFGA CKFHHPK + L+ G PLRPGE C++Y + G Sbjct: 306 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYG 368 HSP 4 Score: 62.003 bits (149), Expect = 2.131e-13 Identity = 27/63 (42.86%), Postives = 36/63 (57.14%), Query Frame = 2 Query: 80 GSVDTGDRCRYNHPRNXXXXXXXXXXTG-DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHS 265 G+ G C+++HPR YP RP E C +YL+TG CKFG++CKFHHP+ S Sbjct: 114 GTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQPS 176 HSP 5 Score: 34.2686 bits (77), Expect = 2.131e-13 Identity = 11/26 (42.31%), Postives = 18/26 (69.23%), Query Frame = 1 Query: 16 KVNESYPQRHGVPDCVFYMRTGVCGY 93 ++ YPQR G P+C +Y++TG C + Sbjct: 93 RMKGEYPQRIGQPECQYYLKTGTCKF 118
BLAST of CF503939 vs. ExPASy Swiss-Prot
Match: C3H6_ORYSJ (Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 9.948e-30 Identity = 52/96 (54.17%), Postives = 65/96 (67.71%), Query Frame = 2 Query: 80 GSVDTGDRCRYNHPRNXXXXXXXXXXTG----DYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 G+ GDRCRYNHPR+ DYP+R G+PIC++Y+KTGTCKFG +CK+HHPK G + V LN G+P+R GEKECSYY+KTG Sbjct: 72 GACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLP-VMLNNSGFPIRLGEKECSYYMKTG 166 HSP 2 Score: 35.4242 bits (80), Expect = 9.948e-30 Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 34 PQRHGVPDCVFYMRTGVCGY 93 P+R G DCV+Y+RTG CG+ Sbjct: 57 PERPGEEDCVYYLRTGACGF 76 HSP 3 Score: 81.6481 bits (200), Expect = 1.330e-15 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 167 YPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMSHVPLNIYGYPLRPGEKECSYYLKTG 355 +P+RPG+P CQ+Y++TG CKFGA+CK+HHP+ S +N PLRPG + C+YY + G Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNG 366 HSP 4 Score: 67.3958 bits (163), Expect = 2.595e-11 Identity = 27/67 (40.30%), Postives = 37/67 (55.22%), Query Frame = 2 Query: 80 GSVDTGDRCRYNHPRNXXXXXXXXXXTGDYPDRPGEPICQFYLKTGTCKFGASCKFHHPKHSGGSMS 280 G+ G C+Y+HP+ +P R GE C +Y+KTG CKFG +CKFHHP+ G M+ Sbjct: 121 GTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMT 187 The following BLAST results are available for this feature:
BLAST of CF503939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503939 ID=CF503939; Name=CF503939; organism=Citrus sinensis; type=EST; length=355bpback to top |