CF504018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504018 vs. ExPASy Swiss-Prot
Match: WRK17_ARATH (Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 6.278e-43 Identity = 64/124 (51.61%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 111 SYVQSQPHSLTLDFTKPSLFSGNVKSTEL-EXXXXXXXXXXXXXXXXXAITGDGSVSNGKQGGSSIFLAPQ--APAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRK 473 S+VQ+ S+TLDFT+PS+F KS+E+ E AITGDGSVS G SSIFLAP P S+GKPPL+ PY+KRC +H DHS+ SGK SG SGN KCHC K RK Sbjct: 106 SFVQANQQSVTLDFTRPSVFGAKTKSSEVVEFAKESFSVSSNSSFMSSAITGDGSVSKG----SSIFLAPAPAVPVTSSGKPPLSGLPYRKRCFEH-DHSEGFSGKISG--SGNGKCHCKKSRK 222 HSP 2 Score: 75.485 bits (184), Expect = 6.278e-43 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 1 Query: 514 KIADIPPDEYSWRKYGQKPIKGSPYPRGYYKC 609 KIADIPPDEYSWRKYGQKPIKGSP+PRGYYKC Sbjct: 237 KIADIPPDEYSWRKYGQKPIKGSPHPRGYYKC 268 HSP 3 Score: 28.8758 bits (63), Expect = 6.278e-43 Identity = 10/17 (58.82%), Postives = 17/17 (100.00%), Query Frame = 2 Query: 467 KENRVKKTIRVPAISSK 517 ++NR+K+T+RVPA+S+K Sbjct: 221 RKNRMKRTVRVPAVSAK 237
BLAST of CF504018 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 3.035e-42 Identity = 62/117 (52.99%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 129 PHSLTLDFTKPSLFSGNVKSTELEXXXXXXXXXXXXXXXXXAITGDGSVSNGKQGGSSIFLA--PQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRK 473 P S+TLDF+KPS+F KS ELE AITGDGSVSNGK IFLA P P S+GKPPLA PY+KRC +H +HS+ SGK SGS G KCHC K RK Sbjct: 117 PSSVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSSFMSSAITGDGSVSNGK-----IFLASAPLQPVNSSGKPPLAGHPYRKRCLEH-EHSESFSGKVSGSAYG--KCHCKKSRK 225 HSP 2 Score: 75.485 bits (184), Expect = 3.035e-42 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 1 Query: 514 KIADIPPDEYSWRKYGQKPIKGSPYPRGYYKC 609 KIADIPPDEYSWRKYGQKPIKGSP+PRGYYKC Sbjct: 240 KIADIPPDEYSWRKYGQKPIKGSPHPRGYYKC 271 HSP 3 Score: 29.261 bits (64), Expect = 3.035e-42 Identity = 11/17 (64.71%), Postives = 17/17 (100.00%), Query Frame = 2 Query: 467 KENRVKKTIRVPAISSK 517 ++NR+K+T+RVPAIS+K Sbjct: 224 RKNRMKRTVRVPAISAK 240
BLAST of CF504018 vs. ExPASy Swiss-Prot
Match: WRKY7_ARATH (Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.929e-17 Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = 1 Query: 514 KIADIPPDEYSWRKYGQKPIKGSPYPRGYYKC 609 K+ADIP DE+SWRKYGQKPIKGSP+PRGYYKC Sbjct: 275 KMADIPSDEFSWRKYGQKPIKGSPHPRGYYKC 306 HSP 2 Score: 38.5058 bits (88), Expect = 1.929e-17 Identity = 19/63 (30.16%), Postives = 34/63 (53.97%), Query Frame = 3 Query: 306 FLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKTE*RKLL 494 F P + S GKPPL++ K+RC ++S +++CHCSK+RK+ ++++ Sbjct: 221 FTNPSQLSGSRGKPPLSSASLKRRC----------------NSSPSSRCHCSKKRKSRVKRVI 267
BLAST of CF504018 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.021e-17 Identity = 30/32 (93.75%), Postives = 32/32 (100.00%), Query Frame = 1 Query: 514 KIADIPPDEYSWRKYGQKPIKGSPYPRGYYKC 609 K+ADIPPD+YSWRKYGQKPIKGSPYPRGYYKC Sbjct: 307 KVADIPPDDYSWRKYGQKPIKGSPYPRGYYKC 338 HSP 2 Score: 26.5646 bits (57), Expect = 2.021e-17 Identity = 10/18 (55.56%), Postives = 18/18 (100.00%), Query Frame = 2 Query: 464 EKENRVKKTIRVPAISSK 517 ++++RV+++IRVPAIS+K Sbjct: 290 KRKHRVRRSIRVPAISNK 307 HSP 3 Score: 25.409 bits (54), Expect = 2.021e-17 Identity = 24/75 (32.00%), Postives = 35/75 (46.67%), Query Frame = 3 Query: 264 DGSVSNGKQGGSSIFLAPQAPAVSAGKPPLAAQPYKKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKTE*RK 488 DGSV+N + S F P S + L + K++C D L GS+S +CHC+K+RK R+ Sbjct: 236 DGSVANIEGKNSFHFGVPS----STDQNSLHS---KRKCPLKGDEHGSLK---CGSSS---RCHCAKKRKHRVRR 297
BLAST of CF504018 vs. ExPASy Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.033e-17 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 1 Query: 514 KIADIPPDEYSWRKYGQKPIKGSPYPRGYYKC 609 KIADIPPDEYSWRKYGQKPIKGSP+PRGYYKC Sbjct: 256 KIADIPPDEYSWRKYGQKPIKGSPHPRGYYKC 287 HSP 2 Score: 27.335 bits (59), Expect = 2.033e-17 Identity = 14/31 (45.16%), Postives = 16/31 (51.61%), Query Frame = 3 Query: 384 DH-KDHSDDLSGKFSGSTSGNNKCHCSKRRK 473 DH HS S S +KCHCSK+RK Sbjct: 211 DHISQHSRRTSCSGSLKCGSKSKCHCSKKRK 241 HSP 3 Score: 25.0238 bits (53), Expect = 2.033e-17 Identity = 10/18 (55.56%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 464 EKENRVKKTIRVPAISSK 517 +++ RVK++I+VPAIS+K Sbjct: 239 KRKLRVKRSIKVPAISNK 256
BLAST of CF504018 vs. ExPASy Swiss-Prot
Match: WRK39_ARATH (Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.584e-17 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 1 Query: 514 KIADIPPDEYSWRKYGQKPIKGSPYPRGYYKC 609 KIADIPPDEYSWRKYGQKPIKGSP+PRGYYKC Sbjct: 256 KIADIPPDEYSWRKYGQKPIKGSPHPRGYYKC 287 HSP 2 Score: 25.0238 bits (53), Expect = 9.584e-17 Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 444 NKCHCSKRRK 473 +KCHCSK+RK Sbjct: 232 SKCHCSKKRK 241 HSP 3 Score: 25.0238 bits (53), Expect = 9.584e-17 Identity = 10/18 (55.56%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 464 EKENRVKKTIRVPAISSK 517 +++ RVK++I+VPAIS+K Sbjct: 239 KRKLRVKRSIKVPAISNK 256
BLAST of CF504018 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.607e-16 Identity = 27/32 (84.38%), Postives = 32/32 (100.00%), Query Frame = 1 Query: 514 KIADIPPDEYSWRKYGQKPIKGSPYPRGYYKC 609 K++D+PPD+YSWRKYGQKPIKGSP+PRGYYKC Sbjct: 234 KMSDVPPDDYSWRKYGQKPIKGSPHPRGYYKC 265 HSP 2 Score: 31.187 bits (69), Expect = 7.607e-16 Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 3 Query: 390 KDHSDDLSGKFSGSTSGNNKCHCSKRRKTE*RKLL 494 K +S++L S S + +CHCSK+RK + R+++ Sbjct: 192 KCNSENLLTGKCASASSSGRCHCSKKRKIKQRRII 226
BLAST of CF504018 vs. ExPASy Swiss-Prot
Match: WRKY1_MAIZE (Protein WRKY1 OS=Zea mays PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.279e-14 Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = 1 Query: 514 KIADIPPDEYSWRKYGQKPIKGSPYPRGYYKC 609 K+ADIP DE+SWRKYGQKPIKGSP+PRGYYKC Sbjct: 326 KVADIPADEFSWRKYGQKPIKGSPHPRGYYKC 357 HSP 2 Score: 27.335 bits (59), Expect = 2.279e-14 Identity = 12/43 (27.91%), Postives = 23/43 (53.49%), Query Frame = 3 Query: 369 KKRCQDHKDHSDDLSGKFSGSTSGNNKCHCSKRRKTE*RKLLE 497 ++RC +D + G + ++CHCSK+RK R+ ++ Sbjct: 285 RRRCAGREDGT--------GRCATGSRCHCSKKRKLRIRRSIK 319 The following BLAST results are available for this feature:
BLAST of CF504018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504018 ID=CF504018; Name=CF504018; organism=Citrus sinensis; type=EST; length=610bpback to top |