CF504274

Overview
NameCF504274
Unique NameCF504274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.511e-37
Identity = 90/190 (47.37%), Postives = 111/190 (58.42%), Query Frame = 1
Query:   94 NSDELQILLNLK-TXXXXXXXXXXXXXXXNNHFCNFTGITCNSDSSFVQEIELSNRNLKGT--------LPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFPEISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            +S+E++ LL LK T                N  C F GI CNSD + V EI L +R+L           LPFDSIC L+ L KL LG NSL G+I  +L  C +L+YLDLG N FSG FP I SL  L+ L LN SG SG+FPW SL ++  L  LSVGDN F   PFP +++ L  L W+YL+N SI G
Sbjct:   23 HSEEVENLLKLKSTFGETKSDDVFKTWTHRNSACEFAGIVCNSDGNVV-EINLGSRSLINRDDDGRFTDLPFDSICDLKLLEKLVLGNNSLRGQIGTNLGKCNRLRYLDLGINNFSGEFPAIDSLQLLEFLSLNASGISGIFPWSSLKDLKRLSFLSVGDNRFGSHPFPREILNLTALQWVYLSNSSITG 211          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.920e-16
Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 1
Query:  193 NFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFPEI-SSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            N+ G+ C+   + V+ + LS   L G L  + I +L++L  L L  NS  G +   L NC  L+YLDL NN FSG  P+I  SL  L  LYL+ +  SG+ P  S+G +  LV L +  N    T  P+ +   +KL +L L N  ++G
Sbjct:   65 NWFGVICDLSGNVVETLNLSASGLSGQLGSE-IGELKSLVTLDLSLNSFSGLLPSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLTFLYLDRNNLSGLIP-ASVGGLIELVDLRMSYNNLSGT-IPELLGNCSKLEYLALNNNKLNG 210          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.245e-15
Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 1
Query:  190 CNFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP-EISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPF 555
            CN+ G+ CNS+ S +  + L    L G +P  S+ +L  L  LSL  N L G+I  D +N   L+ L L +N FSG FP   + LN L  L ++ + F+G  P+ S+ N+T+L  L +G+N F
Sbjct:   54 CNWVGVECNSNQSSIHSLRLPGTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPF-SVNNLTHLTGLFLGNNGF 175          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.123e-15
Identity = 54/173 (31.21%), Postives = 82/173 (47.40%), Query Frame = 1
Query:  190 CNFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFPE-ISSLNELQHLYLNLSGFSGVFPWMS-----------------------LGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            C ++G++C  D S V  ++LS+ NL G  P   IC+L  L  LSL  NS+   +  ++  C  LQ LDL  N+ +G  P+ ++ +  L HL L  + FSG  P                          LGN++ L  L++  NPF P+  P +   L  L  ++LT C + G
Sbjct:   48 CRWSGVSCAGDFSSVTSVDLSSANLAGPFP-SVICRLSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFSGDIPASFGKFENLEVLSLVYNLLDGTIPPFLGNISTLKMLNLSYNPFSPSRIPPEFGNLTNLEVMWLTECHLVG 219          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.730e-15
Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 1
Query:   79 FFTCINSDEL-QILLNLKTXXXXXXXXXXXXXXXNNHFCNFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP-EISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDN 549
            F  C + D+  Q LL+ K+               +   CN+ G+ CN     V EI+L   +L+G+LP  S+  L++L  L+L   +L G I K++ +  +L+ LDL +N  SG  P EI  L +L+ L LN +   G  P M +GN++ LV L + DN
Sbjct:   19 FIPCFSLDQQGQALLSWKSQLNISGDAFSSWHVADTSPCNWVGVKCNRRGE-VSEIQLKGMDLQGSLPVTSLRSLKSLTSLTLSSLNLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIFRLKKLKTLSLNTNNLEGHIP-MEIGNLSGLVELMLFDN 175          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.054e-14
Identity = 63/182 (34.62%), Postives = 85/182 (46.70%), Query Frame = 1
Query:  178 NNHFCNFTGITCN---SDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEI-SKDLNNCVKLQYLDLGNNVFSGSFPEISS-------------------------LNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            N   CN+TGITC+     S  V  I+LS  N+ G  P+   C+++ L  ++L  N+L G I S  L+ C KLQ L L  N FSG  PE S                          L  LQ L LN +  SG+ P   LG +T L  L +    FDP+P P  +  L+ L  L LT+ ++ G
Sbjct:   55 NRSPCNWTGITCHIRKGSSLAVTTIDLSGYNISGGFPY-GFCRIRTLINITLSQNNLNGTIDSAPLSLCSKLQNLILNQNNFSGKLPEFSPEFRKLRVLELESNLFTGEIPQSYGRLTALQVLNLNGNPLSGIVPAF-LGYLTELTRLDLAYISFDPSPIPSTLGNLSNLTDLRLTHSNLVG 234          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.066e-14
Identity = 63/177 (35.59%), Postives = 88/177 (49.72%), Query Frame = 1
Query:  190 CNFTGITCNSDSSFVQEIELSNRNLKGTLPFDSI-CQLQALHKLSLGFNSLYGEISKD-LNNCVKLQYLDLGNNVFSGSFPEI-----------------------SSLNELQHLY-LNLSG--FSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            C + G++C++ S+ V  ++LS+  L G  PF SI C L +LH LSL  NS+ G +S D  + C  L  LDL  N+  GS P+                        SS  E + L  LNL+G   SG  P  SLGN+T L  L +  N F P+  P Q+  L +L  L+L  C++ G
Sbjct:   54 CKWLGVSCDATSNVVS-VDLSSFMLVG--PFPSILCHLPSLHSLSLYNNSINGSLSADDFDTCHNLISLDLSENLLVGSIPKSLPFNLPNLKFLEISGNNLSDTIPSSFGEFRKLESLNLAGNFLSGTIP-ASLGNVTTLKELKLAYNLFSPSQIPSQLGNLTELQVLWLAGCNLVG 226          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y4294_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.390e-13
Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  193 NFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFP-EISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            ++ GI CN  +  V  + L N  L     F     L  L KLS+  NSL G +  DL +   LQ+LDL +N+FS S P EI     L++L L+ + FSG  P  S+G + +L SL +  N     P P  + +LN L +L L++    G
Sbjct:   44 SWNGIVCNGGN--VAGVVLDNLGLTADADFSLFSNLTKLVKLSMSNNSLSGVLPNDLGSFKSLQFLDLSDNLFSSSLPKEIGRSVSLRNLSLSGNNFSGEIP-ESMGGLISLQSLDMSSNSLS-GPLPKSLTRLNDLLYLNLSSNGFTG 188          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.288e-12
Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = 1
Query:  178 NNHFCNFTGITCNS----------DSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFPEISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFDPTPFPDQVVKLNKLNWLYLTNCSIDG 636
            +++ C++ GI+C S          +S  V E+EL  R L G L  +S+ +L  L  L+L  NSL G I+  L N   L+ LDL +N FSG FP + +L  L+ L +  + F G+ P     N+  +  + +  N FD +  P  +   + + +L L + ++ G
Sbjct:   60 SSNCCDWVGISCKSSVSLGLDDVNESGRVVELELGRRKLSGKLS-ESVAKLDQLKVLNLTHNSLSGSIAASLLNLSNLEVLDLSSNDFSGLFPSLINLPSLRVLNVYENSFHGLIPASLCNNLPRIREIDLAMNYFDGS-IPVGIGNCSSVEYLGLASNNLSG 220          
BLAST of CF504274 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12
Identity = 52/154 (33.77%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  181 NHFC-NFTGITCNSDSSFVQEIELSNRNLKGTLPFDSICQLQALHKLSLGFNSLYGEISKDLNNCVKLQYLDLGNNVFSGSFPEISSLNELQHLYLNLSGFSGVFPWMSLGNMTNLVSLSVGDNPFD-PTPFPDQVVKLNKLNWLYLTNCSIDG 636
            NH C ++ G+TC SD + V  + L    L G +P +++ +L++L  LSL  N L G +  D+++   L Y+ L +N FSG  P   S  +L  L L+ + F+G  P  +  N+  L  LS+ +N    P P  D  V L +LN   L+N  ++G
Sbjct:   71 NHICKSWVGVTCTSDGTSVHALRLPGIGLLGPIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVS-RQLNILDLSFNSFTGKIP-ATFQNLKQLTGLSLQNNKLSGPVPNLD-TVSLRRLN---LSNNHLNG 218          
The following BLAST results are available for this feature:
BLAST of CF504274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
IKU2_ARATH1.511e-3747.37Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
PEPR2_ARATH1.920e-1636.91Leucine-rich repeat receptor-like protein kinase P... [more]
Y2267_ARATH1.245e-1538.21Probable inactive receptor kinase At2g26730 OS=Ara... [more]
HSL1_ARATH2.123e-1531.21Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
Y4265_ARATH4.730e-1533.96Probable LRR receptor-like serine/threonine-protei... [more]
HSL2_ARATH1.054e-1434.62LRR receptor-like serine/threonine-protein kinase ... [more]
RLK5_ARATH3.066e-1435.59Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
Y4294_ARATH3.390e-1335.57Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA1.288e-1230.67Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y5830_ARATH1.682e-1233.77Probable inactive receptor kinase At5g58300 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-763 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-16_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504274 ID=CF504274; Name=CF504274; organism=Citrus sinensis; type=EST; length=636bp
ATTTAGTATCATCTTTTTCTTTGGCCAGCAGAAATGTCAACCTCTAAGAT
TTCTCTGTGTCTCCTCCTTTGTCTCCCCTTCTTCACCTGTATCAATTCAG
ATGAGCTTCAGATTCTTCTAAATCTCAAAACCTCCCTCAAAGATTCGAAA
TCCAGTATATTCTCTTCCTGGGTATCAAATAATCACTTTTGTAATTTCAC
CGGAATCACTTGTAACTCGGACAGTTCTTTTGTTCAAGAAATCGAGCTTT
CCAATCGAAACCTGAAAGGAACCCTTCCTTTTGACTCAATTTGTCAGCTT
CAGGCATTGCACAAGCTCTCACTTGGCTTCAATTCCTTGTACGGTGAAAT
CTCAAAAGACTTGAACAACTGTGTCAAACTACAGTACTTGGATCTTGGCA
ACAACGTTTTTAGTGGATCGTTTCCGGAAATATCTTCTCTCAACGAATTA
CAGCACCTGTATCTCAACCTCAGCGGATTCTCCGGCGTGTTTCCATGGAT
GTCGCTTGGAAACATGACCAATCTTGTTTCACTCAGCGTTGGCGATAACC
CTTTTGATCCCACCCCGTTTCCCGACCAAGTCGTGAAGCTGAACAAGCTG
AATTGGCTCTATTTAACAAACTGCTCCATTGATGGG
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