CF504304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504304 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 2.409e-23 Identity = 64/112 (57.14%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 75 SSNKLTLRTTSHLAAFHSQSRLFVKPPSCRRRRTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEARCWEYLYSSF 410 S ++ RT LAAF Q RLF + S RRR A +S E+GIFLPHLVASME VEETYIMVKPDG+QRGLVGEIISRFE QCPK+LAE + SF Sbjct: 31 SPARVNFRTA--LAAFRPQFRLFSRN-SASRRRLRASSSAESGIFLPHLVASMEDVEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSF 139
BLAST of CF504304 vs. ExPASy Swiss-Prot
Match: NDK2_SPIOL (Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 7.749e-22 Identity = 63/136 (46.32%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 15 GVSSSPTLVGKISCSRRLSYSSNKLTLRTTSH----LAAFHSQSRLFVKPPSCRRRRTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAEARCWEYLYSSF 410 G+SS + + S + L R +H LAAFHSQS LF + S + IFLPHLVASMEQVEETYIM+KPDGVQRGLVGEIISRFE CPK+LAE + SF Sbjct: 6 GLSSPCNCISSLPHSSSTTTRHQNLLFRRNNHHQQKLAAFHSQSHLFSTKCPLISHSLPRKKSFKPHIFLPHLVASMEQVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLIGLKMYPCPKELAEEHYKDLKAKSF 141
BLAST of CF504304 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.022e-21 Identity = 59/118 (50.00%), Postives = 71/118 (60.17%), Query Frame = 3 Query: 24 SSPTLVGKISCSRRLSYSSNKLTLRTTSHLAAFHSQSRLFVKPPSCRRRRTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAE 377 SSPT ++SC+ N + + HLAAF LF S R ++ ++ T IFLPHLVASME+VEETYIM+KPDGVQRGLVGEIISRFE CPK+LAE Sbjct: 19 SSPT--SRLSCAPSCKLILNPI--KKNHHLAAFQPAVHLFASNQS---RSHASKRNHTTRIFLPHLVASMEEVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLTGLKLFHCPKELAE 129
BLAST of CF504304 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.252e-20 Identity = 58/125 (46.40%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 9 ALGVSSSPTLVGKISCSRRLSYSSNKLTLRTTSHLAAFHSQSRLFV--KPPSCRRRRTVARNSNETGIFLPHLVASMEQVEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKDLAE 377 A+ V S L S + + LRTT +L+AF S+S LF S + R+S E+GIFLP L+ S+EQV++ YIMVKPDGVQRGLVGEIISRFE QC K+LAE Sbjct: 3 AMAVFSGSNLFATSSLLLTTNSKTRYSQLRTTQNLSAFSSKSHLFSPSSTSSSYPKTFRTRSSTESGIFLPRLITSLEQVDQAYIMVKPDGVQRGLVGEIISRFEKKGFKLTGLKLFQCSKELAE 127 The following BLAST results are available for this feature:
BLAST of CF504304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504304 ID=CF504304; Name=CF504304; organism=Citrus sinensis; type=EST; length=473bpback to top |