CF504354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.996e-60 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 113 HSP 2 Score: 52.7582 bits (125), Expect = 4.996e-60 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALPNQQTVDYPSFKLVIVGDGGT Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGT 24
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.996e-60 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 113 HSP 2 Score: 52.7582 bits (125), Expect = 4.996e-60 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALPNQQTVDYPSFKLVIVGDGGT Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGT 24
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 4.996e-60 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 113 HSP 2 Score: 52.7582 bits (125), Expect = 4.996e-60 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALPNQQTVDYPSFKLVIVGDGGT Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGT 24
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.996e-60 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 113 HSP 2 Score: 52.7582 bits (125), Expect = 4.996e-60 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALPNQQTVDYPSFKLVIVGDGGT Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGT 24
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 4.996e-60 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 113 HSP 2 Score: 52.7582 bits (125), Expect = 4.996e-60 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALPNQQTVDYPSFKLVIVGDGGT Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGT 24
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.996e-60 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 113 HSP 2 Score: 52.7582 bits (125), Expect = 4.996e-60 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALPNQQTVDYPSFKLVIVGDGGT Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGT 24
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN1_ARATH (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 4.996e-60 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 113 HSP 2 Score: 52.7582 bits (125), Expect = 4.996e-60 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALPNQQTVDYPSFKLVIVGDGGT Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGT 24
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.107e-59 Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCR 113 HSP 2 Score: 52.7582 bits (125), Expect = 1.107e-59 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALPNQQTVDYPSFKLVIVGDGGT Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGT 24
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 1.107e-59 Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCR 113 HSP 2 Score: 52.7582 bits (125), Expect = 1.107e-59 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALPNQQTVDYPSFKLVIVGDGGT Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGT 24
BLAST of CF504354 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 9.248e-59 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 135 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 401 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR Sbjct: 25 GKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR 113 HSP 2 Score: 48.521 bits (114), Expect = 9.248e-59 Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 2 Query: 62 MALPNQQTVDYPSFKLVIVGDGGT 133 MALP QQ VDYPSFKLVIVGDGGT Sbjct: 1 MALPGQQAVDYPSFKLVIVGDGGT 24 The following BLAST results are available for this feature:
BLAST of CF504354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504354 ID=CF504354; Name=CF504354; organism=Citrus sinensis; type=EST; length=401bpback to top |