CF509563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.166e-31 Identity = 58/104 (55.77%), Postives = 79/104 (75.96%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 374 LI TLTV E ++YSA+++LPD M + +K+ E TI EMGLQD +T IG W +G+SGG+KRRVSI +E+L RP+LLFLDEPTSGLDSA++++V + L + Sbjct: 137 LIGTLTVRETIWYSARVRLPDKMLRSEKRALVERTIIEMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSR 240 HSP 2 Score: 34.2686 bits (77), Expect = 2.166e-31 Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 2 Query: 2 NGRKRALAYGTSAYVTQDD 58 NGRK L++GT+AYVTQDD Sbjct: 117 NGRKTKLSFGTAAYVTQDD 135
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.892e-27 Identity = 53/102 (51.96%), Postives = 77/102 (75.49%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKL 368 L+ TLTV E + YSA L+LP M+K + + E TI E+GLQD + IG W A+G+SGG+++RVSI +E+LTRP++LFLDEPTSGLDSA++++V+ + + Sbjct: 113 LLGTLTVRETITYSAHLRLPSDMSKEEVSDIVEGTIMELGLQDCSDRVIGNWHARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNI 214 HSP 2 Score: 28.4906 bits (62), Expect = 2.892e-27 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 2 NGRKRALAYGTSAYVTQDD 58 NG+K L YG AYVTQ+D Sbjct: 93 NGKKARLDYGLVAYVTQED 111
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.832e-26 Identity = 49/96 (51.04%), Postives = 74/96 (77.08%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVM 350 L+ TLTV E++ YSA L+LP +T+ + + E TI +MGL++ + IG W +G+SGG+K+R+SI +E+LT+P LLFLDEPTSGLDSA++++V+ Sbjct: 98 LLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGLEECSDRTIGNWHLRGISGGEKKRLSIALEVLTKPSLLFLDEPTSGLDSASAFFVV 193 HSP 2 Score: 30.8018 bits (68), Expect = 1.832e-26 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2 Query: 2 NGRKRALAYGTSAYVTQDD 58 NG+KR L +G +AYVTQ+D Sbjct: 78 NGKKRRLDFGAAAYVTQED 96
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.256e-26 Identity = 55/114 (48.25%), Postives = 82/114 (71.93%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTI 404 L+ TLTV E + YSA L+L +TK + + E TI E+GLQD + IG W ++G+SGG+++RVS+ +E+LTRP++LFLDEPTSGLDSA++++V+ + + RD G RT+ Sbjct: 112 LMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNI-ARD---GGRTV 221 HSP 2 Score: 28.4906 bits (62), Expect = 5.256e-26 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 2 NGRKRALAYGTSAYVTQDD 58 NG+K L YG AYVTQ+D Sbjct: 92 NGKKARLDYGLVAYVTQED 110
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.525e-19 Identity = 44/102 (43.14%), Postives = 72/102 (70.59%), Query Frame = 3 Query: 72 TLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 377 TLTV E + +SA L+LP TMT +K ER M I+E+GL ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ Sbjct: 133 TLTVRENLQFSAALRLPTTMTNHEKNERINMVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ 234
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.525e-19 Identity = 46/104 (44.23%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 374 L LTV E + +SA+ +LP +++K +KK R + I ++GL++A T IG G +G+SGG++RRVSI +++ P +LFLDEPTSGLDS ++Y V+ + ++ Q Sbjct: 195 LFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQ 298
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.602e-19 Identity = 46/104 (44.23%), Postives = 74/104 (71.15%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 374 L LTV E + ++++ +LP +++K +K ER E I ++GL++A NT IG G +G+SGG++RRVSI I+++ P +LFLDEPTSGLDS ++ V+ + ++ Q Sbjct: 169 LFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQ 272
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 4.438e-19 Identity = 43/102 (42.16%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 72 TLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQR 377 TLTV E + +SA L+LP TMT +K ER I+E+GL ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ Sbjct: 132 TLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ 233
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.438e-19 Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAAS 338 L LTV E + Y+A+L+LP T+T+ QKK+RA I+E+GL+ +T IGG +G+SGG+++RVSI E++ P LL LDEPTSGLDS + Sbjct: 247 LFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDTMIGGAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPTSGLDSTTA 338
BLAST of CF509563 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.796e-19 Identity = 46/104 (44.23%), Postives = 72/104 (69.23%), Query Frame = 3 Query: 63 LITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQ 374 L LTV E + +SA+ +LP +++K +KK R + I ++GL+ A T IG G +G+SGG++RRVSI +++ P +LFLDEPTSGLDS ++Y V+ + ++ Q Sbjct: 202 LFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKVLQRIAQ 305 The following BLAST results are available for this feature:
BLAST of CF509563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509563 ID=CF509563; Name=CF509563; organism=Citrus sinensis; type=EST; length=404bpback to top |