CF509969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_SCHPO (Eukaryotic translation initiation factor 5B OS=Schizosaccharomyces pombe GN=SPAC56F8.03 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.027e-58 Identity = 118/196 (60.20%), Postives = 146/196 (74.49%), Query Frame = 2 Query: 2 ELRVKGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKILPNCVFNKK 589 E+RVK Y+HHK+IKAA G+KI A LE A+AG+ L VVGPDDD ED+ EE MED+++++ RID SG GV VQASTLGSLEALLEFLK +KIPV+ ++IGPV+KKDVMR + MLEK KEYA +L FDVKV +A +LAE+LGVKIF A++IYHLFD FTA+ + VFPCVLK + FNK+ Sbjct: 765 EMRVKSAYVHHKEIKAAMGVKICANDLEKAVAGSRLLVVGPDDDEEDLAEEIMEDLENLLGRIDTSGIGVSVQASTLGSLEALLEFLKQ--MKIPVASVNIGPVYKKDVMRCATMLEKAKEYALMLCFDVKVDRDAEDLAEQLGVKIFSANVIYHLFDAFTAHQKKILEQKREESSDVAVFPCVLKTV--AAFNKR 956
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_YEAST (Eukaryotic translation initiation factor 5B OS=Saccharomyces cerevisiae GN=FUN12 PE=1 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 4.936e-53 Identity = 104/196 (53.06%), Postives = 140/196 (71.43%), Query Frame = 2 Query: 2 ELRVKGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKILPNCVFNKK 589 ELR+K Y+HHK++KAA G+KI A LE A++G+ L VVGP+DD +++ ++ M+D+ ++ +D +G+GV VQASTLGSLEALL+FLK +KIPV I +GPV+K+DVM+AS MLEK EYA +L FDVKV EA + AE+ G+KIF AD+IYHLFD FTAY L +FPCVL+ L + NK+ Sbjct: 686 ELRLKSEYVHHKEVKAALGVKIAANDLEKAVSGSRLLVVGPEDDEDELMDDVMDDLTGLLDSVDTTGKGVVVQASTLGSLEALLDFLKD--MKIPVMSIGLGPVYKRDVMKASTMLEKAPEYAVMLCFDVKVDKEAEQYAEQEGIKIFNADVIYHLFDSFTAYQEKLLEERRKDFLDYAIFPCVLQTLQ--IINKR 877
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_RAT (Eukaryotic translation initiation factor 5B OS=Rattus norvegicus GN=Eif5b PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.712e-50 Identity = 101/196 (51.53%), Postives = 136/196 (69.39%), Query Frame = 2 Query: 2 ELRVKGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKILPNCVFNKK 589 ELRVK Y HK+++AAQG+KI + LE +AG L V DD++ +K+E + ++K ++ I +GV VQASTLGSLEALLEFLK+ ++P +GI+IGPVHKKDVM+ASVMLE +YA ILAFDV++ +A+E+A+ LGV+IF A+IIYHLFD FT Y + VFPC +KILP +FN + Sbjct: 908 ELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKDDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTS--EVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEIIYHLFDAFTKYRQDYKKQKQEEFKHIAVFPCKMKILPQYIFNSR 1101
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_MOUSE (Eukaryotic translation initiation factor 5B OS=Mus musculus GN=Eif5b PE=1 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 8.712e-50 Identity = 101/196 (51.53%), Postives = 136/196 (69.39%), Query Frame = 2 Query: 2 ELRVKGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKILPNCVFNKK 589 ELRVK Y HK+++AAQG+KI + LE +AG L V DD++ +K+E + ++K ++ I +GV VQASTLGSLEALLEFLK+ ++P +GI+IGPVHKKDVM+ASVMLE +YA ILAFDV++ +A+E+A+ LGV+IF A+IIYHLFD FT Y + VFPC +KILP +FN + Sbjct: 908 ELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKDDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTS--EVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEIIYHLFDAFTKYRQDYKKQKQEEFKHIAVFPCKMKILPQYIFNSR 1101
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_PONAB (Eukaryotic translation initiation factor 5B OS=Pongo abelii GN=EIF5B PE=2 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 2.535e-49 Identity = 100/196 (51.02%), Postives = 136/196 (69.39%), Query Frame = 2 Query: 2 ELRVKGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKILPNCVFNKK 589 ELRVK Y HK+++AAQG+KI + LE +AG L V +D++ +K+E + ++K ++ I +GV VQASTLGSLEALLEFLK+ ++P +GI+IGPVHKKDVM+ASVMLE +YA ILAFDV++ +A+E+A+ LGV+IF A+IIYHLFD FT Y + VFPC +KILP +FN + Sbjct: 912 ELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKEDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTS--EVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEIIYHLFDAFTKYRQDYKKQKQEKFKHIAVFPCKMKILPQYIFNSR 1105
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_HUMAN (Eukaryotic translation initiation factor 5B OS=Homo sapiens GN=EIF5B PE=1 SV=4) HSP 1 Score: 194.897 bits (494), Expect = 2.535e-49 Identity = 100/196 (51.02%), Postives = 136/196 (69.39%), Query Frame = 2 Query: 2 ELRVKGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKILPNCVFNKK 589 ELRVK Y HK+++AAQG+KI + LE +AG L V +D++ +K+E + ++K ++ I +GV VQASTLGSLEALLEFLK+ ++P +GI+IGPVHKKDVM+ASVMLE +YA ILAFDV++ +A+E+A+ LGV+IF A+IIYHLFD FT Y + VFPC +KILP +FN + Sbjct: 912 ELRVKNQYEKHKEVEAAQGVKILGKDLEKTLAGLPLLVAYKEDEIPVLKDELIHELKQTLNAIKLEEKGVYVQASTLGSLEALLEFLKTS--EVPYAGINIGPVHKKDVMKASVMLEHDPQYAVILAFDVRIERDAQEMADSLGVRIFSAEIIYHLFDAFTKYRQDYKKQKQEEFKHIAVFPCKIKILPQYIFNSR 1105
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_DICDI (Eukaryotic translation initiation factor 5B OS=Dictyostelium discoideum GN=eif5b PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 3.920e-42 Identity = 86/187 (45.99%), Postives = 125/187 (66.84%), Query Frame = 2 Query: 2 ELRVKGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKI 562 E RVK +++HK I+AA GIKI A GLE A+ GT L+VVGP+DD+E ++ EA ++ SV++ ++ SG GV VQASTLGSLEA L FLK +KIPV+ ++IGPVHKK +M AS+ML+K +YA +LAFDVK+ A + A E+ V++ + IY ++ + + V+PC+L++ Sbjct: 741 ESRVKSQFINHKSIRAAMGIKIVAPGLEKAVPGTSLHVVGPNDDIEKIRAEAKREVDSVLNDVETSGIGVSVQASTLGSLEAFLNFLKK--IKIPVANVAIGPVHKKHIMNASIMLDKDPKYAILLAFDVKIEESAIQAANEMKVQVLSDETIYLFEEKLKKHFGAIKEKLRAETASICVWPCILEV 925
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_IGNH4 (Probable translation initiation factor IF-2 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=infB PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.221e-35 Identity = 83/195 (42.56%), Postives = 121/195 (62.05%), Query Frame = 2 Query: 2 ELRVKGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKILPNCVFNK 586 E+R + +++ AA G+KI A GLE A+AG +YVV + LE++KE+ +++ VM DK EGV V+A TLG+LEAL++FLK+ IPV +GPV K+D++ A + K KEY ILAF+VKV PEA+ELAE+ G+KIF ++IY L ++F ++ L V P ++ILP VF + Sbjct: 297 EMRATKRFEPVEEVSAAAGVKIVAPGLEKAVAGAPVYVVDSPEKLEELKEQVKREVEEVMIETDK--EGVIVKADTLGTLEALVQFLKNRG--IPVRMARVGPVTKRDIVEAMTVKSKNKEYGVILAFNVKVLPEAKELAEKEGIKIFQHNVIYRLIEEFEEWLKALREEEKRKVLETLVRPGKIRILPGFVFRR 487
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_STAMF (Probable translation initiation factor IF-2 OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=infB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.107e-28 Identity = 71/191 (37.17%), Postives = 113/191 (59.16%), Query Frame = 2 Query: 14 KGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALLEFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKILPNCVFNK 586 +G ++ +Q+ AA G+KI+A L++A+AG+ ++VV +D +E+ + E+++SV RI GV V+A TLG+LEA++E LK + IPV +GPV K DV+ ASV + EY I+AF+VK+ PEA E A VKIF ++IY L + + ++ L + P ++ILP +F + Sbjct: 301 EGKFVSVEQVVAATGVKISAPDLDNALAGSPIFVVPSEDKIEEYIKIVKEEIESV--RIKTDNIGVVVKADTLGTLEAVVEALKRE--NIPVRLADVGPVSKNDVLEASVSKNHRPEYGVIIAFNVKILPEAEEYAARENVKIFRHNVIYKLIEDYIGWVKQLREQEKIKELESLIRPGKIRILPGYIFRR 487
BLAST of CF509969 vs. ExPASy Swiss-Prot
Match: IF2P_METKA (Probable translation initiation factor IF-2 OS=Methanopyrus kandleri GN=infB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.935e-27 Identity = 69/184 (37.50%), Postives = 106/184 (57.61%), Query Frame = 2 Query: 38 QIKAAQGIKITAQGLEHAIAGTGLYVVGPDDDLEDVKEEAMEDMKSVMSRIDKSGEGVCVQASTLGSLEALL-EFLKSDAVKIPVSGISIGPVHKKDVMRASVMLEKKKEYATILAFDVKVTPEARELAEELGVKIFIADIIYHLFDQFTAYINNLXXXXXXXXXXXXVFPCVLKILPNCVFNK 586 ++ AA G+KI+A LE A+AG L VVG D+D+E+V E E+++ V D+ EG+ ++A TLG+LEA++ EF + D +P+ +G + KKDV+ A + EK I+ F+V VT EARELA+E V I I D+IY L +++ + V P +K+LP +F + Sbjct: 306 EVTAAAGVKISAPELEEAVAGAPLRVVGEDEDVEEVVREVQEEVEEVTIETDQ--EGIIIKADTLGTLEAVVGEFKEKD---VPIRKADVGDITKKDVIEAHAVAEKDPLLGVIVGFNVGVTEEARELADEYDVDIIIDDVIYELVEKYEEMVEKRIERERRKRLDELVRPGKIKVLPGYIFRQ 484 The following BLAST results are available for this feature:
BLAST of CF509969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509969 ID=CF509969; Name=CF509969; organism=Citrus sinensis; type=EST; length=594bpback to top |