CF510199
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510199 vs. ExPASy Swiss-Prot
Match: RD23D_ARATH (Putative DNA repair protein RAD23-4 OS=Arabidopsis thaliana GN=RAD23-4 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 4.966e-23 Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 1 Query: 1 QELGKQNPHLMRLIQEHQTDFLRLINEPVEGGEGNVLGQLASAMPQAVTVTPEEREAIERLEAMG 195 QELGKQNP L+RLIQEHQ DFLRLINEPVE GE NV+ QL +AMPQAVTVTPEEREAIERLE MG Sbjct: 281 QELGKQNPQLVRLIQEHQADFLRLINEPVE-GEENVMEQLEAAMPQAVTVTPEEREAIERLEGMG 344
BLAST of CF510199 vs. ExPASy Swiss-Prot
Match: RD23C_ARATH (Putative DNA repair protein RAD23-3 OS=Arabidopsis thaliana GN=RAD23-3 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.491e-22 Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 1 Query: 1 QELGKQNPHLMRLIQEHQTDFLRLINEPVEGG--EGNVLGQLASAM--PQAVTVTPEEREAIERLEAMG 195 QELGKQNP+LMRLIQ+HQ DFLRLINEPVEGG GN+LGQ+A+ M PQA+ VT EEREAIERLEAMG Sbjct: 318 QELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMG 386
BLAST of CF510199 vs. ExPASy Swiss-Prot
Match: RD23A_ARATH (Putative DNA repair protein RAD23-1 OS=Arabidopsis thaliana GN=RAD23-1 PE=2 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.387e-17 Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 1 Query: 1 QELGKQNPHLMRLIQEHQTDFLRLINEPVEG--GEGNVLGQLASAMPQAVTVTPEEREAIERLEAMG 195 QELGKQNP L+RLIQE+Q +FL+L+NEP EG GEG++ Q MP A+ VTP E+EAI+RLEAMG Sbjct: 272 QELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMG 338
BLAST of CF510199 vs. ExPASy Swiss-Prot
Match: RAD23_ORYSJ (Probable DNA repair protein RAD23 OS=Oryza sativa subsp. japonica GN=RAD23 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17 Identity = 44/66 (66.67%), Postives = 51/66 (77.27%), Query Frame = 1 Query: 1 QELGKQNPHLMRLIQEHQTDFLRLINEPVEG-GEGNVLGQLASAMPQAVTVTPEEREAIERLEAMG 195 QELGKQNP +++LIQE+Q +FL LINEP EG E N+L Q AMPQ + VTPEE EAI RLEAMG Sbjct: 290 QELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMG 355
BLAST of CF510199 vs. ExPASy Swiss-Prot
Match: RD23B_ARATH (Putative DNA repair protein RAD23-2 OS=Arabidopsis thaliana GN=RAD23-2 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 6.946e-17 Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 1 Query: 1 QELGKQNPHLMRLIQEHQTDFLRLINEPVEGGEGNV--LGQLASAMPQAVTVTPEEREAIERLEAMG 195 QELGKQNP L+RLIQE+Q +FL+L+NEP EG +G+V Q MP +V VTPEE+E+IERLEAMG Sbjct: 269 QELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMG 335 The following BLAST results are available for this feature:
BLAST of CF510199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF510199 ID=CF510199; Name=CF510199; organism=Citrus sinensis; type=EST; length=210bpback to top |